Transcript Information: S_Transcript_378135.p1


Annotated TAIR IDAT1G12775.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4353906-4355840 | Forward length=644
E-Value2E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.6598264769053
Replicate 20.18233710378111
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.17616402979323
Condition 3: 24 Hour
Replicate 10
Replicate 20.1873042279037
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_378135.p1 GENE.S_Transcript_378135~~S_Transcript_378135.p1 ORF type:5prime_partial len:121 (+),score=32.40,PPR_2|PF13041.2|0.058,PPR_2|PF13041.2|5.9e-17,PPR_2|PF13041.2|6e-19,PPR_2|PF13041.2|3.7e-09,PPR_1|PF12854.3|2.2e+02,PPR_1|PF12854.3|2.3e-10,PPR_1|PF12854.3|1.5e-11,PPR_1|PF12854.3|1.6e-13,PPR|PF01535.16|1.3e+02,PPR|PF01535.16|2.4e-08,PPR|PF01535.16|2.1e-08,PPR|PF01535.16|2.6e-08,PPR_3|PF13812.2|7.6,PPR_3|PF13812.2|6.5e-08,PPR_3|PF13812.2|9e-05,PPR_3|PF13812.2|5.5e-05 S_Transcript_378135:3-365(+)
AAAGATGCTGAGGCGTTGCTAACTGAGATGTTGGACAACAACATAGCTCCCCAGGTTGAGACTTTCAACACCATGATTGACATGCACTGTAAACAAGGCAGGGTGGATGAAGCACATGCCATCCTAGAATACATGCTTCAGAGAGGTTACACTCCAAACATAATTACTTGCAATGCTCTCTTGGATGGATATTGCTTGTGTGGCAGAATGGATGAGGCATCTCAGCTAATGGATTTCATGGTGGAAAAAGGTTGCTGGCCTGATGTTGTGACTTTCAACTCCTTGATCAATGGATATTGCAAGGCTCAAAACATTGATGCAGCTCTCAGCCTGTTTCAAGAAATTTCTCTTGAGGGCCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_378135.p1 GENE.S_Transcript_378135~~S_Transcript_378135.p1 ORF type:5prime_partial len:121 (+),score=32.40,PPR_2|PF13041.2|0.058,PPR_2|PF13041.2|5.9e-17,PPR_2|PF13041.2|6e-19,PPR_2|PF13041.2|3.7e-09,PPR_1|PF12854.3|2.2e+02,PPR_1|PF12854.3|2.3e-10,PPR_1|PF12854.3|1.5e-11,PPR_1|PF12854.3|1.6e-13,PPR|PF01535.16|1.3e+02,PPR|PF01535.16|2.4e-08,PPR|PF01535.16|2.1e-08,PPR|PF01535.16|2.6e-08,PPR_3|PF13812.2|7.6,PPR_3|PF13812.2|6.5e-08,PPR_3|PF13812.2|9e-05,PPR_3|PF13812.2|5.5e-05 S_Transcript_378135:3-365(+)
KDAEALLTEMLDNNIAPQVETFNTMIDMHCKQGRVDEAHAILEYMLQRGYTPNIITCNALLDGYCLCGRMDEASQLMDFMVEKGCWPDVVTFNSLINGYCKAQNIDAALSLFQEISLEGL*

Click here to download the sequence:
Link to NCBI Protein BLAST