Transcript Information: S_Transcript_378136.p1


Annotated TAIR IDAT1G63080.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23388884-23390728 | Reverse length=614
E-Value2E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.63364288655192
Replicate 20.26265225663708
Replicate 30.43911276389525
Condition 2: 8 Hour
Replicate 10.25387369425158
Replicate 20
Replicate 30.25376009053549
Condition 3: 24 Hour
Replicate 10
Replicate 20.5396145613416
Replicate 30.30026243339424


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_378136.p1 GENE.S_Transcript_378136~~S_Transcript_378136.p1 ORF type:complete len:84 (-),score=17.85,PPR_2|PF13041.2|6e-05,PPR_2|PF13041.2|1.1e-15,PPR_2|PF13041.2|1.6e-06,PPR_1|PF12854.3|2.8e+02,PPR_1|PF12854.3|1.1e-07,PPR_1|PF12854.3|6.8e-10,PPR|PF01535.16|11,PPR|PF01535.16|2e-07,PPR|PF01535.16|1.1e-05,PPR_3|PF13812.2|8,PPR_3|PF13812.2|1.1e-05,PPR_3|PF13812.2|0.035 S_Transcript_378136:46-270(-)
ATGGCCTTATTGGCTGACATGTTGGAAAGTAGCATTTCAACAGGTGTTCAGACCTTCAACATGCTTGTGGACATGTGCTGCAAAGATGGCAGGGTCGAGGAAGCAGAATCCATAGTCGAATTCATGATTCAGAGAGGTGAGGCTCCAAACATCATTACCTACAACTCTCTCTTGGATGGATATTGTTTGCGAGGCCAAATGGACGAGGCATCCAAGTTTACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_378136.p1 GENE.S_Transcript_378136~~S_Transcript_378136.p1 ORF type:complete len:84 (-),score=17.85,PPR_2|PF13041.2|6e-05,PPR_2|PF13041.2|1.1e-15,PPR_2|PF13041.2|1.6e-06,PPR_1|PF12854.3|2.8e+02,PPR_1|PF12854.3|1.1e-07,PPR_1|PF12854.3|6.8e-10,PPR|PF01535.16|11,PPR|PF01535.16|2e-07,PPR|PF01535.16|1.1e-05,PPR_3|PF13812.2|8,PPR_3|PF13812.2|1.1e-05,PPR_3|PF13812.2|0.035 S_Transcript_378136:46-270(-)
MALLADMLESSISTGVQTFNMLVDMCCKDGRVEEAESIVEFMIQRGEAPNIITYNSLLDGYCLRGQMDEASKFT*

Click here to download the sequence:
Link to NCBI Protein BLAST