Transcript Information: S_Transcript_378137.p1


Annotated TAIR IDAT1G12775.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4353906-4355840 | Forward length=644
E-Value3E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.29672993417784


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_378137.p1 GENE.S_Transcript_378137~~S_Transcript_378137.p1 ORF type:internal len:85 (-),score=16.39,PPR_2|PF13041.2|7.6e-05,PPR_2|PF13041.2|9.6e-20,PPR_2|PF13041.2|2.4e-12,PPR_1|PF12854.3|8.4e-12,PPR_1|PF12854.3|3.6e-17,PPR|PF01535.16|4.1e-09,PPR|PF01535.16|1.2e-09,PPR_3|PF13812.2|4.2e+03,PPR_3|PF13812.2|1.5e-05,PPR_3|PF13812.2|1.6e-07 S_Transcript_378137:3-254(-)
ATAGTCGAATTCATGATTCAGAGGGGTGAGACCCCAGACATCATTACTTACAGTGCTCTCTTGGATGGATATTGCTTGTGTGGCAGAATGGATGAGGCATCTCAACTAATGGATTTCATGGTGGAAAAGGGTTGTCATCCTAATGTTGTGACTTTCACCTCCTTGATCAACGGATATTGCAAGGCTAAAAACGTTGATGCAGCTTTCAACTTGTTCCACGAAATGGCTCTTGAGGGTCCCTCACCTGATATT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_378137.p1 GENE.S_Transcript_378137~~S_Transcript_378137.p1 ORF type:internal len:85 (-),score=16.39,PPR_2|PF13041.2|7.6e-05,PPR_2|PF13041.2|9.6e-20,PPR_2|PF13041.2|2.4e-12,PPR_1|PF12854.3|8.4e-12,PPR_1|PF12854.3|3.6e-17,PPR|PF01535.16|4.1e-09,PPR|PF01535.16|1.2e-09,PPR_3|PF13812.2|4.2e+03,PPR_3|PF13812.2|1.5e-05,PPR_3|PF13812.2|1.6e-07 S_Transcript_378137:3-254(-)
IVEFMIQRGETPDIITYSALLDGYCLCGRMDEASQLMDFMVEKGCHPNVVTFTSLINGYCKAKNVDAAFNLFHEMALEGPSPDI

Click here to download the sequence:
Link to NCBI Protein BLAST