Transcript Information: S_Transcript_378381.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.65711114160939
Replicate 20.27238011799401
Replicate 30.68306429939261
Condition 2: 8 Hour
Replicate 10.26327642366831
Replicate 20.69048915554712
Replicate 30.65789653101794
Condition 3: 24 Hour
Replicate 10.40453487945545
Replicate 20.4197002143768
Replicate 30.62276652852139


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_378381.p2 GENE.S_Transcript_378381~~S_Transcript_378381.p2 ORF type:complete len:162 (+),score=13.98,RVT_1|PF00078.23|5.4e-18 S_Transcript_378381:2511-2996(+)
ATGGAAATGAGGCTGCCACAAACGATGGTGGAAGCAATCATGAATTGCGTAACAGGCTCCTCGATGCAAATACTCTGGAATGGTACCCTGACGGAGCCTTTTCACCCATCTAGGGGTATTCGACAAGGGGACCCTTTGTCCCCCTACTTATTTGTGCTTTGTTTGGAGTGGCTCCAGCATATGATCGACGAGGCAGTGGCTAGAGGTACATGGACTCCCGTAGCGGTTTGCAGGGGTGGACCTTCCATCTTTAGCCTCTGCTTCGCTGACGACTTAATTCTCTTTGCAAAAGCTACAGTAGAGGAGGCCTCAGTAAATCATAATTGTCTTGATGCATTTTGTTATGCTTCGGGTGAGAAGGTGAGTTTTGCAAAGTCCAGAGTATATTTCTCACATAACACCAAGGAGAATGTTCGAGATGCAGTTTGCGAGTCCTTGGGCATAGAAGAGACAGAAGACCTTGGAATGTACCTTAGTGTGCCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_378381.p2 GENE.S_Transcript_378381~~S_Transcript_378381.p2 ORF type:complete len:162 (+),score=13.98,RVT_1|PF00078.23|5.4e-18 S_Transcript_378381:2511-2996(+)
MEMRLPQTMVEAIMNCVTGSSMQILWNGTLTEPFHPSRGIRQGDPLSPYLFVLCLEWLQHMIDEAVARGTWTPVAVCRGGPSIFSLCFADDLILFAKATVEEASVNHNCLDAFCYASGEKVSFAKSRVYFSHNTKENVRDAVCESLGIEETEDLGMYLSVP*

Click here to download the sequence:
Link to NCBI Protein BLAST