Transcript Information: S_Transcript_378617.p1


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21121429551731
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.50774738850317
Replicate 20.71021741713418
Replicate 31.6917339369033
Condition 3: 24 Hour
Replicate 10.17337209119519
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_378617.p1 GENE.S_Transcript_378617~~S_Transcript_378617.p1 ORF type:internal len:126 (+),score=20.60,UBN2_2|PF14227.2|5e+02,UBN2_2|PF14227.2|6.9e-07,UBN2_3|PF14244.2|3.4e-06 S_Transcript_378617:2-376(+)
AGAGCTCTATATACAATCATGACTTCCAAGATAGACATTGAGAAGTTCGATGTCCAGATTAGCTTTGCCATGTGGCAAGTACAAATGAAAGCCGCTCTCACTCACCAAGGCTTGAAAAAAGCCTTGGATGGCAAAGAAAAGAAACCTGAATCCATGACTGACGCTCAATGGGAAGAGATGGATGATAAAGCTCTCTCCCTTATTCAACTCAGCCTTACTCGTGAAGTTCTTCGGGAAGTTTTCAGCGAAAAGAACACAAAGGCCCTTTGGGACAAACTTGCGGCTCTTTACAACACCAAGTCTTTCGCCAACAAGCTCGTCCTCAAGGACTGTCTATATACTCTCCGCCAAGATAAAGGTACATCCCTTAAAGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_378617.p1 GENE.S_Transcript_378617~~S_Transcript_378617.p1 ORF type:internal len:126 (+),score=20.60,UBN2_2|PF14227.2|5e+02,UBN2_2|PF14227.2|6.9e-07,UBN2_3|PF14244.2|3.4e-06 S_Transcript_378617:2-376(+)
RALYTIMTSKIDIEKFDVQISFAMWQVQMKAALTHQGLKKALDGKEKKPESMTDAQWEEMDDKALSLIQLSLTREVLREVFSEKNTKALWDKLAALYNTKSFANKLVLKDCLYTLRQDKGTSLKD

Click here to download the sequence:
Link to NCBI Protein BLAST