Transcript Information: S_Transcript_378788.p1


Annotated TAIR IDAT4G24440.1
Annotated Gene Nametranscription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12633460-12634553 | Forward length=106
E-Value1.6E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.42580801976289
Replicate 20.35300463292024
Replicate 30.59016755467522
Condition 2: 8 Hour
Replicate 10.51180936761119
Replicate 20.35794957823563
Replicate 30.51158034251955
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.80710542096371


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_378788.p1 GENE.S_Transcript_378788~~S_Transcript_378788.p1 ORF type:5prime_partial len:125 (+),score=10.65,TFIIA_gamma_C|PF02751.10|5.8e-22,TFIIA_gamma_N|PF02268.12|1.2e-19 S_Transcript_378788:1-375(+)
CGATTTCTGGAGCAATTTCTCCTCACCAAGTACTACTATAAATTGAAGTTGAGTGACCTAATGACGACATTTGAGCTGTATCGGAGGTCTACGATCGGGATGTCCTTAATTGAGACTTTGGATGAGATGGTTTATAAAGGTACTCTGAGTCCTGAGGAAGCTATGAAAGTTCTCCTTCAGTTCGATGAGTCCATAATTGAAGCTCTTGAGTCTCAAGTGCAGACCAAGATCACCATCAAGGGACATCTGCACACCTACAGATTCTGCGACAATGTATGGACATTCATATTACAGGATGCAACGTTCAAAAGTGAGGGGTGCCAAGAGAATGTCAGCCGAGTTAAAATATTGGCATGTGGCTCCGAGTTGAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_378788.p1 GENE.S_Transcript_378788~~S_Transcript_378788.p1 ORF type:5prime_partial len:125 (+),score=10.65,TFIIA_gamma_C|PF02751.10|5.8e-22,TFIIA_gamma_N|PF02268.12|1.2e-19 S_Transcript_378788:1-375(+)
RFLEQFLLTKYYYKLKLSDLMTTFELYRRSTIGMSLIETLDEMVYKGTLSPEEAMKVLLQFDESIIEALESQVQTKITIKGHLHTYRFCDNVWTFILQDATFKSEGCQENVSRVKILACGSELK*

Click here to download the sequence:
Link to NCBI Protein BLAST