Transcript Information: S_Transcript_37879.p1


Annotated TAIR IDAT2G44950.1
Annotated Gene Namehistone mono-ubiquitination 1
Annotated Gene Symbol(s)RDO4, HUB1
Annotation TypeOrtholog
Chromosome Positionchr2:18542602-18548247 | Reverse length=878
E-Value1.2e-320
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.518938031494
Replicate 216.182729470432
Replicate 316.678282973097
Condition 2: 8 Hour
Replicate 122.394088692935
Replicate 220.613696525671
Replicate 321.704291297099
Condition 3: 24 Hour
Replicate 117.615236345491
Replicate 217.191456161557
Replicate 316.173133257495


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_37879.p1 GENE.S_Transcript_37879~~S_Transcript_37879.p1 ORF type:complete len:878 (+),score=206.12,zf-C3HC4_3|PF13920.2|6.3e+03,zf-C3HC4_3|PF13920.2|1.2e-09,zf-C3HC4|PF00097.21|1.9e+03,zf-C3HC4|PF00097.21|6.5e-08,zf-C3HC4_2|PF13923.2|5.7e-06,zf-RING_5|PF14634.2|6.1e-06 S_Transcript_37879:420-3053(+)
ATGGGGAGTACAGGAGAAGCTGACCGTAAACGTCGTCACTTAAGCTCTATCTCTCCTACTGCTATGGCCAAAAAGCAGCCTATCTCTCCCCTCTCTGAGGACAAAAAGCTTGATACTGCAGTACTTCAGTTTCAAAATCAGAAGCTGTCTCAGAAGCTAGAAGCTCAGAAGATTGAAATTTCGGGTCTGGAGAGTAAGTTGTCATGCCGTAAAGAGAAGCAACAGCCTTATGATAAAGTGCTCGTTGCGGTTAATGATGGCTGGTCTAAGCTCGTTGATGACTTGGAAGCACGATCAGCCCACACCAGACGCTTGGTTAGCAGTGGAGAAAATACTCGACATTCGTTCATTATAGAGGATAATGCTTCGTGTTCCTCGGATGATACATTTTTGAAGCGACTTATGGAAACAAGTTCTTCAGAAACCTGCCTAGCCAGTAATTCGCTTGATGAAATGATAGACGATGGAGACAAAGCCTGTGAAAAGTCGCAAAATATTTTGTGCAATATAGTGGCTGCTGTTGATGACTTATGGCGTATGAAAGATGGATTATATGCTGCTGTTTTGATGGCACTTCCAGAACATGGTTCCTTCAGACAGAAGGCATCCTATGAAATCGAAGCAGAAGTTAAGAAGTTACGGTCAACTCTTAGTGATCTTTACTTGAAACACAAATCACTTGCTAGGGAACTGAGAAAGCAGCAGGATAGTGATGTAAAGAACAAAGCTGAGCTGAAATACATGCGAGGGGAACTGGAGAGTACCATTAGAGAACTTGAAGACAGTAATAGTAATTTGGCAGCCCTAAAAGCGGAGAAAGATGCGACAAAGGGGACATTTTTTCCTGTGTTAAACATGGGAAATAAGCATATTGCTAACGATAGGACAGGAGATAAGCAAAAAGAACTGCAAGATATGGAGTTAGCTTTGAAGGAGTCAATGGAACAATCCTCTTCTCGGCTGCAAGAACTCAAGCGGCTTCATGAGGAAAGGATAGAAATTTTAAAGAAGCTGTCTAATTTGCAGGGCACATTGAAGAATCTGAAATGTTTATCTTCTTCTGGACCCTTCAAGTTGGTAAAAGAAGAACTTGAGAAGTCTAAAGCTGACTTCTTCCAGTATCAAGCCTTATATGAAAAACTTCAGGTTGAGAAAGATAAATTGTTGTGGAAGGAAAAAGAAGTTAGTATAAGAAATGATTTAGGTGATGTATTCCGGAGAACTTCAAATTCCGCTCATTCCAGAATAGCTGATCTCGAAACAGAGATACAGAGACAAGTTGATGAAAGGAAGCGGATAGAAGCAAAGCTAGAAGCTGCATCTAGGGAGCCAGGAAGAAAAGAAATAATATCAAACTTTAAAGAGTTTGTTTCTTCCTTTCCGGAGGACATGAGTTCAATGCAAAGTAAGTTACGCAAGTACAAGGAGACGGCTGCTGATGTCCATTCGTTGCGGGCTGAGGTGCAATCCCTTTCAAATATTCTTTCCAGGAAGACCAAAGAATTGGAAACATTATCTTGTCGATCCTCAAATCAAGATGCTGAAATGAAGAGGCTGCAAGCTTTGGTTCAGGATCTGAAAGAGGGCGATGCAGAATTAAAACTCATTCTGGATATGTATAGACGTGAATCCACCATCCCAAGGAATTTCTTGGAGTCGAGAGATAGGGAATACAGGGCATCGGCTCATGTGCATAGCCTGAAGTCTTCCCTTGATGAGCATAATATGGAACTACGTGTTAAGACGGCTATTGAAGCAGAGGCAATATCCCAGCAACGGCTAGCTGCTGCAGAAGCTGAAATTGCAGACTTGAGGGAGAAATGCGAATCTTCTGAAAGGGATAAATCAAAGCTTTCTAATGACCTGAAATCTAAGCATGAAGAAAATGAGGCCTACTTATCAGAGATTGAGACTATTGGGCAGGCCTATGATGACATGCAAAATCAAAATCAGCATCTTTTGCAGCAAATCACAGAGAGAGATGACTATAACATTAAGCTTGTGCTGGAGGGTCTGAGGGGTAGACAGACCCATGATGTTCTACTCATGGAGAAACGAGCTTTGGAGAAGAAGATTCAGCAGGCAAATGTTTCACGAGAATTTTTTGAAATAAAAACTGCACGGATCGAGGATCAGGTGAAAAGCTGCTCAGACCAGATCCATAAACTTGCTGAAGATAGATGTCAGCACTCAGTCGCCCTAGAAAACACCCAAAGGAGAACATTGGAAGCAAGGAAAAGTTCGCAGCAGGCCAGAGAATCTCTTGAAGAATTACAATGTAAGGTCAAGAATAGTCGGGTGAATCTTTCAGATTTGCAGATAGAGTTAGAGAAGGAAAGGTTTGGGAGGAAGCGATTGGAAGAGGAACTGGAGGTCGTAAAAAGAAAAGCTGAACGTCTCAGAGTACAAAACGAGGGTTCGGTTGTTGGAAAGCTCCGTCAGGAACTCCAAGAGTACAAGGAAATACTTAAGTGTAGTGTTTGCGTTGACAGGCCAAAAGAGGTTGTCATCACAAAATGCTATCATCTATTGTGCAATCCTTGTGTTCAGAAAGTAATTGAATCCCGCCACCGCAAGTGTCCTGTGTGTGCTGCAAGTTTTGGGCCTAATGACGTTAAGCCAGTTTACATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_37879.p1 GENE.S_Transcript_37879~~S_Transcript_37879.p1 ORF type:complete len:878 (+),score=206.12,zf-C3HC4_3|PF13920.2|6.3e+03,zf-C3HC4_3|PF13920.2|1.2e-09,zf-C3HC4|PF00097.21|1.9e+03,zf-C3HC4|PF00097.21|6.5e-08,zf-C3HC4_2|PF13923.2|5.7e-06,zf-RING_5|PF14634.2|6.1e-06 S_Transcript_37879:420-3053(+)
MGSTGEADRKRRHLSSISPTAMAKKQPISPLSEDKKLDTAVLQFQNQKLSQKLEAQKIEISGLESKLSCRKEKQQPYDKVLVAVNDGWSKLVDDLEARSAHTRRLVSSGENTRHSFIIEDNASCSSDDTFLKRLMETSSSETCLASNSLDEMIDDGDKACEKSQNILCNIVAAVDDLWRMKDGLYAAVLMALPEHGSFRQKASYEIEAEVKKLRSTLSDLYLKHKSLARELRKQQDSDVKNKAELKYMRGELESTIRELEDSNSNLAALKAEKDATKGTFFPVLNMGNKHIANDRTGDKQKELQDMELALKESMEQSSSRLQELKRLHEERIEILKKLSNLQGTLKNLKCLSSSGPFKLVKEELEKSKADFFQYQALYEKLQVEKDKLLWKEKEVSIRNDLGDVFRRTSNSAHSRIADLETEIQRQVDERKRIEAKLEAASREPGRKEIISNFKEFVSSFPEDMSSMQSKLRKYKETAADVHSLRAEVQSLSNILSRKTKELETLSCRSSNQDAEMKRLQALVQDLKEGDAELKLILDMYRRESTIPRNFLESRDREYRASAHVHSLKSSLDEHNMELRVKTAIEAEAISQQRLAAAEAEIADLREKCESSERDKSKLSNDLKSKHEENEAYLSEIETIGQAYDDMQNQNQHLLQQITERDDYNIKLVLEGLRGRQTHDVLLMEKRALEKKIQQANVSREFFEIKTARIEDQVKSCSDQIHKLAEDRCQHSVALENTQRRTLEARKSSQQARESLEELQCKVKNSRVNLSDLQIELEKERFGRKRLEEELEVVKRKAERLRVQNEGSVVGKLRQELQEYKEILKCSVCVDRPKEVVITKCYHLLCNPCVQKVIESRHRKCPVCAASFGPNDVKPVYI*

Click here to download the sequence:
Link to NCBI Protein BLAST