Transcript Information: S_Transcript_378893.p3


Annotated TAIR IDAT5G16486.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5383597-5384226 | Reverse length=209
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.348631750518
Replicate 219.664660257785
Replicate 319.244594174192
Condition 2: 8 Hour
Replicate 123.643367525517
Replicate 227.721638531835
Replicate 324.327869549163
Condition 3: 24 Hour
Replicate 114.24666314604
Replicate 220.693045352317
Replicate 317.271617364373


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_378893.p3 GENE.S_Transcript_378893~~S_Transcript_378893.p3 ORF type:complete len:92 (-),score=3.89,zf-RVT|PF13966.2|6e-05 S_Transcript_378893:323-598(-)
ATGGTGAAGCAACAACTTGTAATGCCAAAGTGGAGATTTATCAGCTGGTTAACTCTCAAAAGCAGGCTGCCTATGTGGTCACAGCCCAGTAGATGTCCTATTTGCTGCATACAGGAGGAAACTTACCAGCATCTATTTATAGATTGTGAATTCTTTCATGTACTATGGGAAAGGCTATCAACGTGGGTTGGCTTGTCTGTTACAAACAGACGCGGGCAGAGATGGTTAATGAAATACTCAGGAAATATAAAAGAAACAGTTGTAAGCATCTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_378893.p3 GENE.S_Transcript_378893~~S_Transcript_378893.p3 ORF type:complete len:92 (-),score=3.89,zf-RVT|PF13966.2|6e-05 S_Transcript_378893:323-598(-)
MVKQQLVMPKWRFISWLTLKSRLPMWSQPSRCPICCIQEETYQHLFIDCEFFHVLWERLSTWVGLSVTNRRGQRWLMKYSGNIKETVVSIW*

Click here to download the sequence:
Link to NCBI Protein BLAST