Transcript Information: S_Transcript_37894.p1


Annotated TAIR IDAT5G06600.1
Annotated Gene Nameubiquitin-specific protease 12
Annotated Gene Symbol(s)UBP12
Annotation TypeOrtholog
Chromosome Positionchr5:2019545-2027834 | Reverse length=1116
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.069850150071
Replicate 234.036367520223
Replicate 336.557309603436
Condition 2: 8 Hour
Replicate 145.876151055896
Replicate 244.723793499525
Replicate 344.110908833796
Condition 3: 24 Hour
Replicate 137.723237415697
Replicate 234.015880897952
Replicate 336.935484956246


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_37894.p1 GENE.S_Transcript_37894~~S_Transcript_37894.p1 ORF type:complete len:1124 (+),score=261.13,USP7_ICP0_bdg|PF12436.4|2.2e-77,USP7_ICP0_bdg|PF12436.4|3.4e+02,USP7_C2|PF14533.2|82,USP7_C2|PF14533.2|85,USP7_C2|PF14533.2|3.1e-61,UCH|PF00443.25|1.6e-47,UCH|PF00443.25|4.1e+02,UCH_1|PF13423.2|6.6e-23,MATH|PF00917.22|1.9e-20,MATH|PF00917.22|3.1e+03,MATH|PF00917.22|5.4e+03 S_Transcript_37894:252-3623(+)
ATGACTGTCATGACTCCTGCCCCAATCGACCAAGAAGATGATGAGATGCTCGTGCCGCATTCCGATATAACCGACAATCACCAGCCTATGGAAGTCGTTGCTCAAGCGGAAACTCCGAATACAGTGGAGAATCAACCTGCTGAAGATCCTCCTGCGTCGAGGTTTACTTGGAAGATTGAGAATTTCTCGCGGTTGAATGCCAAGAAGCACTACTCTGATGTCTTTGTCGTTGGCGGTTATAAATGGCGGATACTTATTTTCCCTAAAGGGAACAATGTTGACTATTTGTCTATGTATCTGGATGTTGCTGATTCTGCTAGTTTGCCTTATGGGTGGAGTAGGTTCGCACAGTTCAGCTTGGGTGTTGTCAATCAAATTCATAACAAGTACTCCGTGAAAAAAGATACACAGCACCAGTTCAATGCTAGGGAAAGTGATTGGGGCTTTACATCTTTTATGCCCTTAAGCGAGTTATATGATCCTAGTAGAGGATATCTTGTTAATGATACTGTTGTTGTTGAAGCTGAGGTTTCTGTTCGTAAGATTGTGGACTATTGGTCCTATGACTCAAAAAAAGAGACTGGATATGTTGGACTTAAGAATCAAGGAGCAACATGCTACATGAATTCTCTACTTCAAACTCTTTTCCACATTCCTTATTTCAGAAAGGCCGTGTACCATATGCCTACAACTGAGAATGATATGCCGTCTGCGAGCATTCCTCTGGCTCTGCAGAGTTTATTCTATAAGCTTCAGTATAGTGACAGCAGTGTTGCGACAAAAGAGTTGACCAAATCTTTTGGATGGGATACATATGATTCCTTCATGCAACATGATGTGCAGGAGCTTAATAGAGTTCTTTGTGAAAAGCTTGAAGATAAAATGAAGGGCACTGTTGTTGAGGGTACTATTCAACAGTTGTTTGAAGGGCATCATATGAACTATATTGAGTGCATGAATGTGGATTACAAATCCACAAGGAAGGAGTCTTATTATGATCTTCAGCTTGACGTTAAGGGTTGCCGGGATGTATATGCTTCTTTTGACAAGTATGTGGAAGTTGAAAGATTGGAGGGTGATAACAAGTATCATGCTGAGCAATATGGCTTGCAGGATGCGAGAAAGGGTGTTTTGTTCATTGATTTTCCTCCAGTTCTTCAACTGCAGCTCAAACGATTTGAGTATGATTTTATGCGGGACACTATGGTAAAGATCAATGATCGTTATGAATTCCCCCTTCAACTTGATCTTGATCGTGAAAATGGGAAGTATTTGTCTCCTGAGGCTGATAGAAGTGTCCGCAACCTTTATACACTCCATAGTGTTTTGGTTCATAGTGGCGGGGTGCATGGTGGACACTATTATGCTTTTATACGGCCAACTCTCTCTGATCAGTGGTACAAATTTGATGACGAGCGGGTTACAAAAGAAGATATGAAGAGGGCCTTGGAGGAGCAGTATGGTGGAGAAGAGGAGCTACCACAAACCAATCCTGGTTTCAACAATACCCCATTCAAATTCACAAAATATTCGAATGCCTATATGCTTGTGTATATACGTGAAACTGATAAAGAGAAGATTATGTGTAATGTGGATGAGAAGGATATTGCGGAGCATCTGAGGGAACGTTTGAAGAGAGAACAAGAAGAGAAGGAGCATAAGAAAAAGGAGAAGGCTGAGGCACACCTTTACACTATCATAAAGGTTGCACATGATAAAGACCTGACTGAGCAGATTGGGAAGGATATCTATTTTGATCTTGTAGATCATGACAAAGTGAAATCTTTTCGAATTCAGAAGCAAATGCCCTTTAACCTGTTCAAGGAGGAGGTTGCTAAAGAATTTGGGATACCACTACAGTTTCAGCGTTTTTGGCTATGGGCGAAGCGTCAAAATCATACATATAGACCAAATCGACCACTGACACCAATGGAGGAAAACCAATCTGTTGGACAGCTGAGGGAAGTCTCTAACAAGGTTCATAATGCAGAGCTCAAGTTGTTCTTGGAAGTGGAGCTTGACGCTGATTTACGACCTATTTCTCCTCCAGAAAAGACAAAGGATGATATTTTATTATTCTTCAAGCATTATGATCCTGAGAAAGAAGAGCTGCGGTATGTGGGAAGGCTATTTGTAAAGGGTAATGGTAAACCAGGAGAGATTTTGGACAAGTTAAAGGAAATGGCTGGCTATGCGGCTGAGGATGAAATTGAATTATATGAGGAAATAAAGTTTGAGCCAACAGTTATGTGTGAACATATTGACCGAAAACTCTCATTTCGGACTAGTCAGCTTGAAGATGGAGATATAGTTTGTTTCCAGAAAGCTGTTCCACCTGAAAGTGCAGAAAGACACCGTTATCCTGATGTCCCCTCGTTCTTGGATTATGTGCACAATCGCCAGGTTGTTCACTTCAGATTGCTGGAAAGACCTAAGGAAGATGATTTTTGCTTGGAGCTGTCAAGACTTCATACTTATGACGATGTTGTGGAAAGAGTTGCTCGCCAACTTGGCTTGGATGATCCATCCAAAATTAGGCTTACTTCTCACAACTGCTATTCTCAGCAGCCAAAGCCCCAGCCCATTAAGTATCGGGGCGTTGATCATCTGTCAGACATGCTCATCCACTACAATCAGACTTCTGACATATTGTACTATGAAGTTCTGGACATACCATTGCCTGAATTGCAAGGTTTGAAAACTTTGAAAGTTGCTTTCCATCATGCCACAAAAGATGAAGTAACCATTCATACTATTCGACTGCCGAAACAGAGTACTGTAGGGGATGTTCTGAATGATTTGAAGACAAAGGTTGAGTTGTCACATCCTGATGCTGAGCTTAGGTTACTTGAAGTTTTCTACCACAAAATCTATAAGATTTTCCCCCCTAATGAAAAGATCGAGAACATAAATGATCAATACTGGACATTACGAGCTGAAGAGATTCCCGAAGAAGAGAAGAACCTGGGTCCTCAAGATCGATTAATTCATGTGTACCATTTTACAAAGGAGACAGCTCAGAATCAAATGCAAATACAAAACTTTGGTGAACCCTTTTTCTTGGTGATACGTGAAGGAGAAAACTTGGCTGAGGTCAAAGTGAGAATACAAAAGAAATTGCAAGTGCCAGACGAGGAGTTTGCCAAGTGGAAGTTTGCATTTCTCTCATTAGGTCGTCCAGAGTACCTCCAGGACACAGACATCGTGTCTAGTCGTTTCCAGAGAAGAGACGTTTATGGTGCTTGGGAACAGTATCTTGGATTGGAGCATGCTGACACAGCTCCTAAAAGAACGTACACGGCGAATCAGGCTGTTTCTGGCAACCAGAGGGCGCGCCAGCATCGTCTGCAAGTTGAAGTCAAAATTACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_37894.p1 GENE.S_Transcript_37894~~S_Transcript_37894.p1 ORF type:complete len:1124 (+),score=261.13,USP7_ICP0_bdg|PF12436.4|2.2e-77,USP7_ICP0_bdg|PF12436.4|3.4e+02,USP7_C2|PF14533.2|82,USP7_C2|PF14533.2|85,USP7_C2|PF14533.2|3.1e-61,UCH|PF00443.25|1.6e-47,UCH|PF00443.25|4.1e+02,UCH_1|PF13423.2|6.6e-23,MATH|PF00917.22|1.9e-20,MATH|PF00917.22|3.1e+03,MATH|PF00917.22|5.4e+03 S_Transcript_37894:252-3623(+)
MTVMTPAPIDQEDDEMLVPHSDITDNHQPMEVVAQAETPNTVENQPAEDPPASRFTWKIENFSRLNAKKHYSDVFVVGGYKWRILIFPKGNNVDYLSMYLDVADSASLPYGWSRFAQFSLGVVNQIHNKYSVKKDTQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVVVEAEVSVRKIVDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSASIPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECMNVDYKSTRKESYYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQYGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPEADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDMKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRETDKEKIMCNVDEKDIAEHLRERLKREQEEKEHKKKEKAEAHLYTIIKVAHDKDLTEQIGKDIYFDLVDHDKVKSFRIQKQMPFNLFKEEVAKEFGIPLQFQRFWLWAKRQNHTYRPNRPLTPMEENQSVGQLREVSNKVHNAELKLFLEVELDADLRPISPPEKTKDDILLFFKHYDPEKEELRYVGRLFVKGNGKPGEILDKLKEMAGYAAEDEIELYEEIKFEPTVMCEHIDRKLSFRTSQLEDGDIVCFQKAVPPESAERHRYPDVPSFLDYVHNRQVVHFRLLERPKEDDFCLELSRLHTYDDVVERVARQLGLDDPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLIHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVTIHTIRLPKQSTVGDVLNDLKTKVELSHPDAELRLLEVFYHKIYKIFPPNEKIENINDQYWTLRAEEIPEEEKNLGPQDRLIHVYHFTKETAQNQMQIQNFGEPFFLVIREGENLAEVKVRIQKKLQVPDEEFAKWKFAFLSLGRPEYLQDTDIVSSRFQRRDVYGAWEQYLGLEHADTAPKRTYTANQAVSGNQRARQHRLQVEVKIT*

Click here to download the sequence:
Link to NCBI Protein BLAST