Transcript Information: S_Transcript_37898.p1


Annotated TAIR IDAT5G06600.1
Annotated Gene Nameubiquitin-specific protease 12
Annotated Gene Symbol(s)UBP12
Annotation TypeOrtholog
Chromosome Positionchr5:2019545-2027834 | Reverse length=1116
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.744750114486
Replicate 219.887329617579
Replicate 317.139469606041
Condition 2: 8 Hour
Replicate 123.848690403959
Replicate 223.419667351694
Replicate 325.484435715076
Condition 3: 24 Hour
Replicate 118.775470937684
Replicate 216.741796719093
Replicate 316.579815549789


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_37898.p1 GENE.S_Transcript_37898~~S_Transcript_37898.p1 ORF type:5prime_partial len:1217 (+),score=250.79,USP7_ICP0_bdg|PF12436.4|2.5e-77,USP7_ICP0_bdg|PF12436.4|3.7e+02,USP7_C2|PF14533.2|44,USP7_C2|PF14533.2|1e+02,USP7_C2|PF14533.2|3.5e-61,UCH|PF00443.25|2.1e-47,UCH_1|PF13423.2|7.8e-23,MATH|PF00917.22|2.5e-19,MATH|PF00917.22|3.8e+02,MATH|PF00917.22|6.4e+03 S_Transcript_37898:1-3651(+)
CTCTCTCTTCAAACCAAATCACGAGCGAATGCAAAACCAAAACCTGAACTCACCCCCAAAAAAATAAAAAATAAAAAAAACCCGAGTTGTATTGTAGAACTCGTTTCTTCCTTCCACCAACAAAACAACTCTTTCACAAAAAGCCCACTCTCTCAAAAACTCACAGAAAAAACCCGAACTCCATATACCAAAATCGAAACCCAAAAGCTCTTTGATTTCTTCCCTCTCTCCTCTCTCCTCTCTCCATTCTCTCCACTTTCTCTCTCTTCTGATCGCGAGTTCTTCTCTCTCTTCATCATGACTATGATGACACAGCCACCTTTGGATCAGGAGGATGAGGAGATGCTTGTTCCACATTCTGATGTCGTCGTTGAAGGTCCTCAGCCTATGGAAGCCGTAGCACAAGCGGAAGCCAATAGTACAGCCGAGAACCAGGCAGCTGAAGAGCCCCCAACTTCCAAGTTCACATGGACTATTGAGAACTTCTCTAGGTTGAACACGAAAAAGCACTACTCAGACATCTTCGTTGTTGGAGGTTATAAATGGCGGATATTAATTTTTCCGAAGGGCAATAATGTGGACTATTTATCTATGTATCTTGATGTTGCGGATGCTCCAACATTGCCTTATGGTTGGAGTAGATATGCTGCCTTTAGCTTGTGTGTGGTTAATCAAGCTCATCACAAGTACTCAATACGAAAAGAGACGCAACATCAATTCAATGCTAGGGAGAGTGATTGGGGTTTCACATCATTTATGCCTCTCAGTGATTTATATGATCCTTCTAGGGGATATCTAGTCAATGATATTGTGGTAATTGAAGCCGAGGTTGCTGTTCGTCGTGTCATGGATTACTGGTCATATGACTCTAAGAAGGAAACAGGCTATGTGGGACTTAAGAATCAGGGAGCTACGTGCTATATGAATTCCCTTCTTCAAACGTTGTATCATATACCTTACTTTCGAAAGGCCGTCTACCATATGCCGACAACTGAGAATGATAATCCTACTAATAGCATCCCTTTGGCCTTGCAAAGTCTATTCTACAAGCTTCAATATAATGATACTAGTGTCTCAACCAAAGAATTGACCAAGTCTTTTGGTTGGGACACATATGATTCTTTCATGCAGCATGACGTGCAGGAACTGAATAGAGTCTTGTGTGAGAAGCTTGAGGATAAAATGAAGGGGACTGTTGTGGAAGGAACAATACAGCAGTTGTTTGAAGGGCATCACATGAACTATATTGAATGTGTAAATGTTGACTATAAATCTACGAGGAAGGAATCATTTTACGATCTGCAACTGGATGTGAAAGGGTGTCGTGATGTTTACGCTTCCTTTGACAAGTATGTGGAAGTTGAACGACTTGAAGGCGATAACAAGTACCACGCAGAGGATCATGGTCTACAGGATGCCAAGAAAGGCGTTCTGTTTCTTGACTTCCCTCCAGTGCTTCAACTCCAGCTTAAGAGGTTTGAATATGATTTTATGCGGGACATTATGGTTAAGATCAATGATCGTTATGAGTTTCCTCTTCAGCTTGACCTCGATAGGGAGAATGGCAAATATTTAGCCCCTGAAGCAGATAGAAGTGTTCGAAACCTATACACACTTCATAGTGTTTTGGTACATAGTGGTGGAGTCCATGGTGGACATTATTACGCATTTATTAGGCCAACTCTTACAGATCAATGGTTCAAGTTTGATGATGAACGGGTTACGAAAGAAGATGTCAAGAGGGCATTAGAAGAGCAATATGGTGGTGAAGAAGAGTTACCACAGACAAATCCCGGGTTCAATAATACTCCCTTCAAGTTTACAAAATATTCAAATGCTTACATGCTTGTGTATATACGGGAAAGTGACAAGGACAAAATAATATGTAATGTGGATGAGAAAGATATTGCTGAACACCTGAGGACAAGATTGAAGAAAGAACAAGAAGAGAAGGAAGACAAGAGGAGGTACAAAGCACAGGCGCATCTTTACACAATAATAAAGGTTGCACGAGATGAAGATCTTGCAGAACAGATAGGAAGGGATATTTATTTTGATCTTGTTGATCATGACAAGGTTCGTAGTTTCCGTATACAGAAGCAGATGACATTTAATGTTTTCAAGGAGGAGGTTGCCAAAGAATTTGGGATACCAGTACAGTTTCAGCGTTTTTGGCTATGGGCGAAGCGTCAAAATCATACATATAGACCAAATCGACCACTGACACCAATGGAGGAAAACCAATCTGTTGGACAGCTGAGGGAAGTCTCTAACAAGGTTCATAATGCAGAGCTCAAGTTGTTCTTGGAAGTGGAGCTTGACGCTGATTTACGACCTATTTCTCCTCCAGAAAAGACAAAGGATGATATTTTATTATTCTTCAAGCATTATGATCCTGAGAAAGAAGAGCTGCGGTATGTGGGAAGGCTATTTGTAAAGGGTAATGGTAAACCAGGAGAGATTTTGGACAAGTTAAAGGAAATGGCTGGCTATGCGGCTGAGGATGAAATTGAATTATATGAGGAAATAAAGTTTGAGCCAACAGTTATGTGTGAACATATTGACCGAAAACTCTCATTTCGGACTAGTCAGCTTGAAGATGGAGATATAGTTTGTTTCCAGAAAGCTGTTCCACCTGAAAGTGCAGAAAGACACCGTTATCCTGATGTCCCCTCGTTCTTGGATTATGTGCACAATCGCCAGGTTGTTCACTTCAGATTGCTGGAAAGACCTAAGGAAGATGATTTTTGCTTGGAGCTGTCAAGACTTCATACTTATGACGATGTTGTGGAAAGAGTTGCTCGCCAACTTGGCTTGGATGATCCATCCAAAATTAGGCTTACTTCTCACAACTGCTATTCTCAGCAGCCAAAGCCCCAGCCCATTAAGTATCGGGGCGTTGATCATCTGTCAGACATGCTCATCCACTACAATCAGACTTCTGACATATTGTACTATGAAGTTCTGGACATACCATTGCCTGAATTGCAAGGTTTGAAAACTTTGAAAGTTGCTTTCCATCATGCCACAAAAGATGAAGTAACCATTCATACTATTCGACTGCCGAAACAGAGTACTGTAGGGGATGTTCTGAATGATTTGAAGACGAAGGTTGAGTTGTCACATCCCGATGCTGAGCTTAGGTTACTGGAAGTTTTCTACCACAAAATCTATAAGATTTTCCCCCCTAATGAAAAGATCGAGAACATAAATGATCAATACTGGACATTACGAGCTGAAGAGATTCCCGAAGAAGAGAAGAACCTGGGTCCTCAAGATCGATTAATTCATGTGTACCATTTTACAAAGGAGACAGCTCAGAATCAAATGCAAATACAAAACTTTGGTGAACCCTTTTTCTTGGTGATACGTGAAGGAGAAAACTTGGCTGAGGTCAAAGTGAGAATACAAAAGAAATTGCAAGTGCCAGACGAGGAGTTTGCCAAGTGGAAGTTTGCATTTCTCTCATTAGGTCGTCCAGAGTACCTCCAGGACACAGACATCGTGTCTAGTCGTTTCCAGAGAAGAGACGTTTATGGTGCTTGGGAACAGTATCTTGGATTGGAGCATGCTGACACAGCTCCTAAAAGAACGTACACGGCGAATCAGAATCGTCATACGTTCGAGAAGCCTGTAAAAATCTATAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_37898.p1 GENE.S_Transcript_37898~~S_Transcript_37898.p1 ORF type:5prime_partial len:1217 (+),score=250.79,USP7_ICP0_bdg|PF12436.4|2.5e-77,USP7_ICP0_bdg|PF12436.4|3.7e+02,USP7_C2|PF14533.2|44,USP7_C2|PF14533.2|1e+02,USP7_C2|PF14533.2|3.5e-61,UCH|PF00443.25|2.1e-47,UCH_1|PF13423.2|7.8e-23,MATH|PF00917.22|2.5e-19,MATH|PF00917.22|3.8e+02,MATH|PF00917.22|6.4e+03 S_Transcript_37898:1-3651(+)
LSLQTKSRANAKPKPELTPKKIKNKKNPSCIVELVSSFHQQNNSFTKSPLSQKLTEKTRTPYTKIETQKLFDFFPLSSLLSPFSPLSLSSDREFFSLFIMTMMTQPPLDQEDEEMLVPHSDVVVEGPQPMEAVAQAEANSTAENQAAEEPPTSKFTWTIENFSRLNTKKHYSDIFVVGGYKWRILIFPKGNNVDYLSMYLDVADAPTLPYGWSRYAAFSLCVVNQAHHKYSIRKETQHQFNARESDWGFTSFMPLSDLYDPSRGYLVNDIVVIEAEVAVRRVMDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDNPTNSIPLALQSLFYKLQYNDTSVSTKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECVNVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEDHGLQDAKKGVLFLDFPPVLQLQLKRFEYDFMRDIMVKINDRYEFPLQLDLDRENGKYLAPEADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLTDQWFKFDDERVTKEDVKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRTRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLAEQIGRDIYFDLVDHDKVRSFRIQKQMTFNVFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPMEENQSVGQLREVSNKVHNAELKLFLEVELDADLRPISPPEKTKDDILLFFKHYDPEKEELRYVGRLFVKGNGKPGEILDKLKEMAGYAAEDEIELYEEIKFEPTVMCEHIDRKLSFRTSQLEDGDIVCFQKAVPPESAERHRYPDVPSFLDYVHNRQVVHFRLLERPKEDDFCLELSRLHTYDDVVERVARQLGLDDPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLIHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVTIHTIRLPKQSTVGDVLNDLKTKVELSHPDAELRLLEVFYHKIYKIFPPNEKIENINDQYWTLRAEEIPEEEKNLGPQDRLIHVYHFTKETAQNQMQIQNFGEPFFLVIREGENLAEVKVRIQKKLQVPDEEFAKWKFAFLSLGRPEYLQDTDIVSSRFQRRDVYGAWEQYLGLEHADTAPKRTYTANQNRHTFEKPVKIYN*

Click here to download the sequence:
Link to NCBI Protein BLAST