Transcript Information: S_Transcript_379179.p1


Annotated TAIR IDAT1G60720.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:22357072-22357941 | Forward length=289
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.42467555162522
Replicate 20.58677631801901
Replicate 30.78479728015322
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.1133821681116
Condition 3: 24 Hour
Replicate 10
Replicate 20.72331313541534
Replicate 31.0732784853241


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_379179.p1 GENE.S_Transcript_379179~~S_Transcript_379179.p1 ORF type:complete len:188 (+),score=25.55,zf-RVT|PF13966.2|2.1e-15 S_Transcript_379179:401-964(+)
ATGAAGCTTGCTGATCAACACCATTGTTTTCAATCTAGCACATGGCCTACTAATACTGCTGGGCAGTACACAATTGCTGCAGGCTATAAAAAGTTGCTTAGTGATCAAGGAAAATTTGCCCTATCAAAGGTCATATGGGGAAAGTTAAATGTGCCTAAGCACGCCATCTATCTCTGGTTGATTGCACAGAAGAGAATTGTCACGAAAGACAGATTGCTTAAGATGAATATACCCCTTGTTGATGATTCTTGCCTTCTCTGTCATGAGACAAAAGAAACTGCAGAGCATTTGTTTTCTCTTGTTCTTTTTCAAAGAAGATCATGGAAGATATCTCTAACAAGGAATGTGCCATATGCAAATTTGGAATGGCTAGACTGGTTAAAAAAACACAGAGGGTCTCAACCCAACATGACGCTAAGATATGCTGTTTTTACTGCTACAGCCTATAACATATGTCTCGCAAGAAACAAAATGGTACTCCAAAAGGAAAAAGTCTCTCCAGATCAAGTGGTGAATGTTATCAAGCATACCATTAGATTTAAAATTCTGAGTTTTGCTGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_379179.p1 GENE.S_Transcript_379179~~S_Transcript_379179.p1 ORF type:complete len:188 (+),score=25.55,zf-RVT|PF13966.2|2.1e-15 S_Transcript_379179:401-964(+)
MKLADQHHCFQSSTWPTNTAGQYTIAAGYKKLLSDQGKFALSKVIWGKLNVPKHAIYLWLIAQKRIVTKDRLLKMNIPLVDDSCLLCHETKETAEHLFSLVLFQRRSWKISLTRNVPYANLEWLDWLKKHRGSQPNMTLRYAVFTATAYNICLARNKMVLQKEKVSPDQVVNVIKHTIRFKILSFAV*

Click here to download the sequence:
Link to NCBI Protein BLAST