Transcript Information: S_Transcript_379434.p1


Annotated TAIR IDAT3G02010.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:337965-340442 | Forward length=825
E-Value2E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.92700796460146
Replicate 30.92988585295465
Condition 2: 8 Hour
Replicate 11.2544347245372
Replicate 20.37599745612986
Replicate 30.8956238489488
Condition 3: 24 Hour
Replicate 10.73428179800317
Replicate 20.38090439624113
Replicate 30.42389990596834


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_379434.p1 GENE.S_Transcript_379434~~S_Transcript_379434.p1 ORF type:5prime_partial len:119 (-),score=17.40,PPR_2|PF13041.2|0.03,PPR_2|PF13041.2|29,PPR_2|PF13041.2|0.00046,PPR_3|PF13812.2|37,PPR_3|PF13812.2|0.94,PPR_3|PF13812.2|0.00013,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|1.5,PPR|PF01535.16|0.00076,PPR|PF01535.16|2.6e+03,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|20,PPR_1|PF12854.3|6.8e-05,PPR_1|PF12854.3|2e+03 S_Transcript_379434:259-615(-)
GGTACCATTAAAGTATTTGAGGAGATGGTTTCAACAGGTCTTCAACCAGACTCCGTAAGCATATTGAATGTCCTGACCACTTGCAGTCATCGTGGGCTTGTTGATGAAGGAATGAGGTATTTCGATAACATGACTCAAGTGTATCTTATGAAGCCTCAACGAGAACATTATGTTACCATGGTTGATATCTTATGCAGAAGAGGCCGTTTTGAGCAAGCAGAGAAACTGATGGCTCAAATGCCATTTGCACCAGACGAGATCATGTTGTCATCAATCTTGAATTCCTGCAGGATTCACAAAAAACCAAGAACTTGCAAAGAAAGTGGCAGAACGTCTATTCAATATGGAGTTGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_379434.p1 GENE.S_Transcript_379434~~S_Transcript_379434.p1 ORF type:5prime_partial len:119 (-),score=17.40,PPR_2|PF13041.2|0.03,PPR_2|PF13041.2|29,PPR_2|PF13041.2|0.00046,PPR_3|PF13812.2|37,PPR_3|PF13812.2|0.94,PPR_3|PF13812.2|0.00013,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|1.5,PPR|PF01535.16|0.00076,PPR|PF01535.16|2.6e+03,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|20,PPR_1|PF12854.3|6.8e-05,PPR_1|PF12854.3|2e+03 S_Transcript_379434:259-615(-)
GTIKVFEEMVSTGLQPDSVSILNVLTTCSHRGLVDEGMRYFDNMTQVYLMKPQREHYVTMVDILCRRGRFEQAEKLMAQMPFAPDEIMLSSILNSCRIHKKPRTCKESGRTSIQYGVD*

Click here to download the sequence:
Link to NCBI Protein BLAST