Transcript Information: S_Transcript_379490.p1


Annotated TAIR IDAT5G65950.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1683, C-terminal (InterPro:IPR012880), Foie gras liver health family 1 (InterPro:IPR021773); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26380290-26384960 | Forward length=1190
E-Value5E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1389693764572
Replicate 22.828562763784
Replicate 35.0126410893889
Condition 2: 8 Hour
Replicate 15.9054927032061
Replicate 24.7038245857887
Replicate 34.7004176769959
Condition 3: 24 Hour
Replicate 13.6968264368698
Replicate 23.719189592016
Replicate 33.1042516190912


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_379490.p1 GENE.S_Transcript_379490~~S_Transcript_379490.p1 ORF type:internal len:195 (-),score=32.44 S_Transcript_379490:2-583(-)
CCCACCAAAAAATCTCCTCTCTCTTCCCAAGATCTAACAATAATCTCCATCATCATTTCTCATTCAACCAATCCCCAAACCCTAACAACAATGGAGGAATACCCCGAAGAACTCCGAACACCACCGGTCCCCCTAATCTCCCTCGTAGGATATCCAGAACTCCACGCATCGATCTCAGCTCACCTTCATTCTGAAAAGCCCCCAATCAACACTCTCGCATTGCCCGATTTCTCCAAGATCTCCGTCCTTTCCAAAAACCCTAAATCCACCGATCATCAATCACAACCACAACCGCCTTTGGGGATTCTGAAAAAGGATTGGTTGATTAAACACCGTAAGAAGATCCCTGCCGTTGTCGGTGCTCTCTTCCCTTCTGATCATGTTTCCGGTGATCCTGCTCAGTGGCTCCAGCTTTGCACTCTCCTTGATAATCTCAAAGCAGTTCTTCGTACAAGGAATATCAAGTTGATAGTTGTTGTTGTGCAATCATCTTCTGAAGATGATATGAATGAAGATCGCATGATTGCATTACGGAAACGTGCTGAAGTAGACTCCAAATACATTATTAATTTCTCCATCAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_379490.p1 GENE.S_Transcript_379490~~S_Transcript_379490.p1 ORF type:internal len:195 (-),score=32.44 S_Transcript_379490:2-583(-)
PTKKSPLSSQDLTIISIIISHSTNPQTLTTMEEYPEELRTPPVPLISLVGYPELHASISAHLHSEKPPINTLALPDFSKISVLSKNPKSTDHQSQPQPPLGILKKDWLIKHRKKIPAVVGALFPSDHVSGDPAQWLQLCTLLDNLKAVLRTRNIKLIVVVVQSSSEDDMNEDRMIALRKRAEVDSKYIINFSIR

Click here to download the sequence:
Link to NCBI Protein BLAST