Transcript Information: S_Transcript_379618.p1


Annotated TAIR IDAT5G27390.1
Annotated Gene NameMog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9674634-9676118 | Reverse length=241
E-Value8.6E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 170.968003293815
Replicate 271.952520899283
Replicate 367.789516415397
Condition 2: 8 Hour
Replicate 157.25194877933
Replicate 267.317094105123
Replicate 362.603300173189
Condition 3: 24 Hour
Replicate 161.205033924097
Replicate 264.724579006325
Replicate 366.577108204496


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_379618.p1 GENE.S_Transcript_379618~~S_Transcript_379618.p1 ORF type:5prime_partial len:111 (-),score=31.24 S_Transcript_379618:165-497(-)
GTGAGTGTTATTATTAAGCCATCAAATCAACTGAAGATCACCTTCCTTGAGGCCCAGGATGTTACTGACTTGGGTTCACTTAAGGAGGCAGCAAAGATTTTCATCCCAGGCGGGGCAACAATATTTGCAGCTCGAACTATAAAAATAAAAGAAGATGAAGGTTTCAGGACCTACTACTTCTATGAGTTTGGCAGAGATGAGCAGCATGTTGCACTTGTAGCTGCTGTTAATGGTGGAAAGGCATTTGTTGCTGGTGCGACTGCTCCACAATCAAAGTGGGATAGTGATGGTGTAAAGCTTCGAAGTGCTGCGATGTCCCTGACTTTATTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_379618.p1 GENE.S_Transcript_379618~~S_Transcript_379618.p1 ORF type:5prime_partial len:111 (-),score=31.24 S_Transcript_379618:165-497(-)
VSVIIKPSNQLKITFLEAQDVTDLGSLKEAAKIFIPGGATIFAARTIKIKEDEGFRTYYFYEFGRDEQHVALVAAVNGGKAFVAGATAPQSKWDSDGVKLRSAAMSLTLL*

Click here to download the sequence:
Link to NCBI Protein BLAST