Transcript Information: S_Transcript_379645.p1


Annotated TAIR IDAT3G16890.1
Annotated Gene Namepentatricopeptide (PPR) domain protein 40
Annotated Gene Symbol(s)PPR40
Annotation TypeHomolog
Chromosome Positionchr3:5768401-5770380 | Reverse length=659
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.64909759110196
Replicate 20.80717522771396
Replicate 30.22491141565366
Condition 2: 8 Hour
Replicate 10.26006573557479
Replicate 20.81848226730707
Replicate 31.5596961662182
Condition 3: 24 Hour
Replicate 10
Replicate 21.9347156223711
Replicate 30.61517181475893


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_379645.p1 GENE.S_Transcript_379645~~S_Transcript_379645.p1 ORF type:5prime_partial len:82 (+),score=4.42 S_Transcript_379645:2-247(+)
GGGTATGAGATTATTGAGGATTTCCTTTGCATTTTGTTTTGTATTTGGGATAGATTAGGACTAGCTAAGTATTGTGTTGAGATTTTCTGGGCAAATTTCTTTCTTCTCTTGCTTAATTGCGAATTCTTTGCTCGTGAAACTCCAAAGCAATCATATGCTAGATTGTCATATAATAGATTATTTAAGTACCTAGGCATCTTGAATTTGATTATCATCAACCTTGATTTTGTTTGGCAGGGCCTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_379645.p1 GENE.S_Transcript_379645~~S_Transcript_379645.p1 ORF type:5prime_partial len:82 (+),score=4.42 S_Transcript_379645:2-247(+)
GYEIIEDFLCILFCIWDRLGLAKYCVEIFWANFFLLLLNCEFFARETPKQSYARLSYNRLFKYLGILNLIIINLDFVWQGL*

Click here to download the sequence:
Link to NCBI Protein BLAST