Transcript Information: S_Transcript_379702.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value5E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8734784263033
Replicate 22.3496472633454
Replicate 32.3635997507864
Condition 2: 8 Hour
Replicate 11.2702849827895
Replicate 21.049942354933
Replicate 31.6160028870203
Condition 3: 24 Hour
Replicate 11.1435047314571
Replicate 21.5136480655683
Replicate 31.4113418349433


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_379702.p1 GENE.S_Transcript_379702~~S_Transcript_379702.p1 ORF type:complete len:554 (+),score=67.15,RVT_3|PF13456.2|1.8e-19,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.2e+04,zf-RVT|PF13966.2|1.6e-16,zf-RVT|PF13966.2|1.6e+04 S_Transcript_379702:125-1663(+)
ATGGAAGGGGGCTTGGGATTTCGGCACATAGAGACTTTTAATGAGGCTATGTTGGCAAAGCAGTGTTGGAGAATTCTTAATAACCCCAACTCCCTGGTGAGTCAAATGCTGAAAGCAAGGTACTTTCCCACTTGTGAATTTATGCATGCAAAGCTTGGACACCATCCAAGTTATGTTTGGAGGAGTATTTTAGGAGCTAGGTGGATCTTGGAGAAGGGTTGTAGGTGGGTGATAGGGGATGGGGAGCAAGTCAATATTTGGTCAGATCCCTGGCTATTGAAACCTCCAAATTTCAAGCCATTGTCCCCTGTGATTGACAAGGATAGCAATGTTGCGATCTTGATTGACAAGGAGGCTGGGACTTGGAATGAATTTAAAGTGAGACAGATGTTTTTACCTTTCGAGGCAGATGATATCCTTGGCATTCCCCTATGCTCCAGTTTACCATGTGACAAATTAGCATGGCATTATACCAAGGATGGTTTCTACTCAGTCAAATCAGGGTACTACTTTGCTAGATGGGTGAAATATAGTATGGATGAAGCTGCAACCTCTTCTCCTCGGAAGGAACCTTGGAGTGCTATGTGGAGTGTCAATGTGCCACCGAAAATGAGAAGTTTTGCTTGGAGGTTAGCGGTGGGAGCACTGCCAACTCGTGCAAACATAGCCCGAAGAATTCAGGAAGCGGATTCAACATGTTTTCGGTGTGGGGCAGCTAGGGAGACCGATATACATGCTGTATGTCTATGCCCAGGAGCCTTAGAGATTTGGATGAGATTGGGGCTGGAGGAAGTATTGGAGGATATGGTGTTCGATTCAGCCCTGGATTGGATGGATTACTGGCGTGACAAACTGACGGAGGAGCGCTTTGAGTATTTTGTGGTAGGTGCTTGGATGGCGTGGAACCGTAGGAATGAAGTGTTGCATGGTAAAGAATGCAGGAGTGTGGAGCGGGACATACAAGAGGGCATCCAATATATTAAATCCTATCAGGAAGCTAATGTGTCCCCCCCAAGAAGTCATTTGGTGCTTGAAGACAAATGGAAATTGCCTCCAACTGGCTACATTAAAGTGAACGTGGACGCAGGTTTCCTTTGCACAGGTGGCATGGGTTTTGGTGCTATAGTGCGGGATGACAAAGGACAAGTGCTAAGAGCGGCGGTAAAGCAGCGGGCACATGCTTGCGAGATCGAAATGGCAGAGGCTTTGGCAATTCAATTTGGACTACAAATGGCGGTGCAATGCGGAGGAAGAGCAGTGATAGTGGAAGGAGATAATCTGAGTATAATCAATAAGCTAAAAAGGGGTTGTCCTTCAATTTCTTACTTAGGAAATATTTTGTTTGAAATTGAACATTTAGCTAGTTTTTTTCATAGTATTACTTGGAGTCATGTGCGTCGTAGTGGCAATAAGGTAGCGCATGTTTTAGCACATTGGAGTCCTAGTTTATTTTCTACCCGTATTTGGGTGGATGGTTACCCGGATTTGGTCTTAGACTTGGTAGTGTCGGATGTTTGTAATTCATTTTTAACTAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_379702.p1 GENE.S_Transcript_379702~~S_Transcript_379702.p1 ORF type:complete len:554 (+),score=67.15,RVT_3|PF13456.2|1.8e-19,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.2e+04,zf-RVT|PF13966.2|1.6e-16,zf-RVT|PF13966.2|1.6e+04 S_Transcript_379702:125-1663(+)
MEGGLGFRHIETFNEAMLAKQCWRILNNPNSLVSQMLKARYFPTCEFMHAKLGHHPSYVWRSILGARWILEKGCRWVIGDGEQVNIWSDPWLLKPPNFKPLSPVIDKDSNVAILIDKEAGTWNEFKVRQMFLPFEADDILGIPLCSSLPCDKLAWHYTKDGFYSVKSGYYFARWVKYSMDEAATSSPRKEPWSAMWSVNVPPKMRSFAWRLAVGALPTRANIARRIQEADSTCFRCGAARETDIHAVCLCPGALEIWMRLGLEEVLEDMVFDSALDWMDYWRDKLTEERFEYFVVGAWMAWNRRNEVLHGKECRSVERDIQEGIQYIKSYQEANVSPPRSHLVLEDKWKLPPTGYIKVNVDAGFLCTGGMGFGAIVRDDKGQVLRAAVKQRAHACEIEMAEALAIQFGLQMAVQCGGRAVIVEGDNLSIINKLKRGCPSISYLGNILFEIEHLASFFHSITWSHVRRSGNKVAHVLAHWSPSLFSTRIWVDGYPDLVLDLVVSDVCNSFLTS*

Click here to download the sequence:
Link to NCBI Protein BLAST