Transcript Information: S_Transcript_379722.p3


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value6E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.81468371128104
Replicate 21.0130872756002
Replicate 30.65866914584288
Condition 2: 8 Hour
Replicate 10.97922710639896
Replicate 20.91313667917251
Replicate 30.9787889206369
Condition 3: 24 Hour
Replicate 11.3374418463629
Replicate 21.1563169171606
Replicate 30.2573678000522


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_379722.p3 GENE.S_Transcript_379722~~S_Transcript_379722.p3 ORF type:complete len:196 (+),score=10.12,zf-RVT|PF13966.2|8.9e-09 S_Transcript_379722:4796-5383(+)
ATGTCCGTAACAAGATCCACCCCACCCCCTTTTACCTCGGGCTCTCACATTTGGCAAGACATAGGGAAAAGCTGGGATTTCCTAACATTCCATACTATTTGGACTGTGGGGCAAGGTACTATGTTTCTTTTTTGGTTAGATCATTGGCTTCCCTGTGGGAGGATTAGAGATCTTATTCAGGGCCCTCTTAGCTCTCGGGAATTTGGTTTGGTTGTGAGCGATTGTGTCTCCAACAACCAGTGGGATCTTAGTGCTCTCTCCTTTGACCTCCCCGAGAATCTTAAGGAATTGATTCAACTCTTCCCCATCCCCTCTCCCCCCCTACCTGACTTTCCCTTTACCTCCCTGGTAAGGGATGGTAAGTTTGACCTCTCTAGGACTTATGCTAGGCTTAGAGACCCCCTATGCTTGGACCGTCCTAATTTGAAGTGGGTTTGGAAGTGCCGCTCTCTCCCCAAAATCCAAATGTTTGTGTGGCTTTATTTCTTTGATAGGCTCCCCCATAGGGTTAATCTGGCCAATAGAGGGATTCTGAGTTCTTACCTGTCTTATCTGTGTTGCTCGAGAGGGCTTACTCCACATCCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_379722.p3 GENE.S_Transcript_379722~~S_Transcript_379722.p3 ORF type:complete len:196 (+),score=10.12,zf-RVT|PF13966.2|8.9e-09 S_Transcript_379722:4796-5383(+)
MSVTRSTPPPFTSGSHIWQDIGKSWDFLTFHTIWTVGQGTMFLFWLDHWLPCGRIRDLIQGPLSSREFGLVVSDCVSNNQWDLSALSFDLPENLKELIQLFPIPSPPLPDFPFTSLVRDGKFDLSRTYARLRDPLCLDRPNLKWVWKCRSLPKIQMFVWLYFFDRLPHRVNLANRGILSSYLSYLCCSRGLTPHP*

Click here to download the sequence:
Link to NCBI Protein BLAST