Transcript Information: S_Transcript_379776.p1


Annotated TAIR IDAT2G27940.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:11897963-11898742 | Forward length=237
E-Value3E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5898558249001
Replicate 22.7393396430471
Replicate 32.8468653014954
Condition 2: 8 Hour
Replicate 11.073425687104
Replicate 21.2011730813276
Replicate 31.0014156592944
Condition 3: 24 Hour
Replicate 11.9059294320653
Replicate 22.2815917694309
Replicate 32.2005810554799


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_379776.p1 GENE.S_Transcript_379776~~S_Transcript_379776.p1 ORF type:5prime_partial len:298 (-),score=23.91,zf-RING_2|PF13639.2|2.1e-14,zf-RING_11|PF17123.1|9.5e-10,zf-C3HC4|PF00097.21|2.3e-08,zf-rbx1|PF12678.3|7.9e-08,zf-C3HC4_2|PF13923.2|1e-06 S_Transcript_379776:318-1211(-)
TTTCTCACTGTGTTCTTTTTTACACCCCCCATTTCTCCATTCTCATCCAAACCAAAAAAAAAAACCCTTTGTTTTCTCCCTCAGGCATTTCTACAAACACTTGGTGTGCAAGCAATGAATACCTTCAACAACAAATATTCAATGACACCCCACTTGAGAAAACCCCTTCCACCAGATGATCACCCCCTCACACCCCAAATTTCCTCTCCAATATCATCATCAAAGTTCGCAGAAGCTGAAGCTCAAAATCTCAACACGAACTACAGCTCAACTTGCTGTTACAACAGCTTAAAACTAACCCCACCTTTTGACTCAGCAATGGCGTTAACCGTTCTAGTCCTTTTAACTGCTCTCTTCTTTATGGGCTTCTTTTCCATCTACATTCGCCGTTTCGATGACGAATCCTCCATCGACCCCACGCGCCGCCGTCGCGTGTCGACGGGAACGTCGGAGTCTTCGTACTTGGGGAGCTCTAAGGGGAAGGGGGTTGACCCCACCACGATAGAGTCACTGCCGGTGTACGTTTACGACGGTGGGGATGCGAAGCAGGGGATTGATAAGGTGGAATGTGCAATTTGTTTGAGCGAGTTTGAGGAGAGAGAGTGGGTGAAGGAGATTCCGTACTGTGGTCACGTGTTCCACGTGGAGTGTATCGACACGTGGCTCTCTAGTCACGTGACGTGTCCTCTTTGTCGGACGGAGAAGCTCTTCCGTCACGTGGCGGGTGAGCAGAAGGTGGAGGTCGAGGAGGGATTCGGTGTGAGTGAAGTGCTGGATAGTGGTGTGAGGGAGGTGAGATTGACGGTGGATTTTGGTGACACGTGGAATGGTGGACAGAGTAGAGATGTGGGGCCATTGGGTGTGCGAACTTTGCATCGATCATTGAGTTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_379776.p1 GENE.S_Transcript_379776~~S_Transcript_379776.p1 ORF type:5prime_partial len:298 (-),score=23.91,zf-RING_2|PF13639.2|2.1e-14,zf-RING_11|PF17123.1|9.5e-10,zf-C3HC4|PF00097.21|2.3e-08,zf-rbx1|PF12678.3|7.9e-08,zf-C3HC4_2|PF13923.2|1e-06 S_Transcript_379776:318-1211(-)
FLTVFFFTPPISPFSSKPKKKTLCFLPQAFLQTLGVQAMNTFNNKYSMTPHLRKPLPPDDHPLTPQISSPISSSKFAEAEAQNLNTNYSSTCCYNSLKLTPPFDSAMALTVLVLLTALFFMGFFSIYIRRFDDESSIDPTRRRRVSTGTSESSYLGSSKGKGVDPTTIESLPVYVYDGGDAKQGIDKVECAICLSEFEEREWVKEIPYCGHVFHVECIDTWLSSHVTCPLCRTEKLFRHVAGEQKVEVEEGFGVSEVLDSGVREVRLTVDFGDTWNGGQSRDVGPLGVRTLHRSLSF*

Click here to download the sequence:
Link to NCBI Protein BLAST