Transcript Information: S_Transcript_379912.p1


Annotated TAIR IDAT5G61400.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24681550-24683514 | Forward length=654
E-Value5E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.22686585443759
Replicate 20
Replicate 30.22676433622321
Condition 3: 24 Hour
Replicate 10.23239237755951
Replicate 20.24110437847178
Replicate 30.80495886399307


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_379912.p1 GENE.S_Transcript_379912~~S_Transcript_379912.p1 ORF type:internal len:94 (-),score=5.75,PPR_1|PF12854.3|1.3e-11,PPR_1|PF12854.3|2.4e-12,PPR_1|PF12854.3|1.3e-08,PPR_2|PF13041.2|4.6e-10,PPR_2|PF13041.2|4.8e-21,PPR|PF01535.16|2.3e-08,PPR|PF01535.16|4e-11,PPR|PF01535.16|0.0091,PPR_3|PF13812.2|3.5e-05,PPR_3|PF13812.2|1.6e-08,PPR_3|PF13812.2|86 S_Transcript_379912:2-280(-)
TTGAACATCAGATCCGATGTGTTTACTTATAGTATACTTATAAAGGGTCTATGCGATGTCGGGAGAGTGAAAGAAGCATCTAATCTACTTTCAAAGATGAAAAGTAGGGGCATCATTGCAAATGTTGTGGCGTACAACTCGCTTATAAATGGACACTGCAAACATGGAAACATGGAAAAAGCTCTGGAGTTGTGTTCACAAATGATGCAAGAGGGCATACAACCAAATGTCGTGACCTTCTCTTCCCTCATACATGGTTATTGTCAAGCCAGGGATATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_379912.p1 GENE.S_Transcript_379912~~S_Transcript_379912.p1 ORF type:internal len:94 (-),score=5.75,PPR_1|PF12854.3|1.3e-11,PPR_1|PF12854.3|2.4e-12,PPR_1|PF12854.3|1.3e-08,PPR_2|PF13041.2|4.6e-10,PPR_2|PF13041.2|4.8e-21,PPR|PF01535.16|2.3e-08,PPR|PF01535.16|4e-11,PPR|PF01535.16|0.0091,PPR_3|PF13812.2|3.5e-05,PPR_3|PF13812.2|1.6e-08,PPR_3|PF13812.2|86 S_Transcript_379912:2-280(-)
LNIRSDVFTYSILIKGLCDVGRVKEASNLLSKMKSRGIIANVVAYNSLINGHCKHGNMEKALELCSQMMQEGIQPNVVTFSSLIHGYCQARDM

Click here to download the sequence:
Link to NCBI Protein BLAST