Transcript Information: S_Transcript_379956.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value3E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1987838394225
Replicate 20.39752773977504
Replicate 30
Condition 2: 8 Hour
Replicate 10.76848253395074
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.19680075216751
Replicate 20.2041784826698
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_379956.p1 GENE.S_Transcript_379956~~S_Transcript_379956.p1 ORF type:internal len:111 (+),score=21.83,RVT_1|PF00078.23|1.9e-13 S_Transcript_379956:2-331(+)
AATGGTGCTGCTAGGGATTGGTTTTCTTCTTCTCGGGGGCTACGGCAGGGGGACCCCCTCTCGCCTTTTCTTTTTACCATGGTGGTGGATGTCTTGAGTAAGATGGTGGAGAAGGCAGTGGCTAGAGGGGCGGCAGGCGGTTTTCCAGTTGGGCGAGAGAATGTTATAGTTTCCCATTTGCAATTTGCGGATGATACTATTCTTTTTCTGGAAGCTGATCTTGGAAACTTTAGGAATGTTTTGACTATTCTACAACTTTTTGAGGCAATTTCCGGAATGAGGATTAATCTTGGGAAATGTAGTGTGGCTGGGGTTAATGTAGGCAACGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_379956.p1 GENE.S_Transcript_379956~~S_Transcript_379956.p1 ORF type:internal len:111 (+),score=21.83,RVT_1|PF00078.23|1.9e-13 S_Transcript_379956:2-331(+)
NGAARDWFSSSRGLRQGDPLSPFLFTMVVDVLSKMVEKAVARGAAGGFPVGRENVIVSHLQFADDTILFLEADLGNFRNVLTILQLFEAISGMRINLGKCSVAGVNVGNE

Click here to download the sequence:
Link to NCBI Protein BLAST