Transcript Information: S_Transcript_3800.p1


Annotated TAIR IDAT1G47530.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:17451724-17454110 | Forward length=484
E-Value5E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.038237308007
Replicate 27.4510298067046
Replicate 38.1698085282616
Condition 2: 8 Hour
Replicate 18.8855792988054
Replicate 210.98968003355
Replicate 39.1620748477551
Condition 3: 24 Hour
Replicate 17.2816278301981
Replicate 210.735489694059
Replicate 310.398562167022


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_3800.p1 GENE.S_Transcript_3800~~S_Transcript_3800.p1 ORF type:complete len:228 (+),score=31.74,MatE|PF01554.14|5e-30,MatE|PF01554.14|3.7e+03 S_Transcript_3800:1759-2442(+)
ATGTTATGCTTGGAGTTATGGTACTCTACTGTGGTGATCCTAATGGTGGGCAGGTTACCAAATCCACAAGTAGCTATAGATGCTATCTCAATAGGCATGAATGTGGAAGTTTGGACCTTGATGATTACATTGGGCTTCAATGCTGCTGTCAGTGTGAGAGTCTCCAATGAGATTGGAGCTGTAAATCCGAGGGCAGCAAAGTTCTCTGCAGCTGTGACAACTGCTACTTCAACTCTGTTTGGGATCATATTCGTAGCCATCACAATCGCAACGAAGAATCACTTTCCAAATATGTTCACAACAGACCCTACAGTAATAAAGGAGACTAGCAAGCTGGGGTATTTCTTGTCAGTTATTATCCTCATAAACAGTGTTCAAGCAGGTTTACAAGGGGTGGCTGTTGGTGCTGGCTGGCAAGCTAGAGTTGCTGTGATTAGCATAATATGTTACTACATTGTTGGGCTTCCAGTTGGATGCTTGCTCAGTTTCAATTTTAATCTTGGCGTACAGGGAATCTGGCTCGGAGTATGTACTGGAATGGTGTTACAAACAGCTGTTTTGTTGCTGATGCTATATCGAACTAACTGGAGTCAAGAGGCTCTGCAAGCTGAAGAACGTGTCCAGTCATGGAGTTCCAGTCCTTCAACATTGCCTCAGCCCCCTCAGAATTCTTGCAAGATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_3800.p1 GENE.S_Transcript_3800~~S_Transcript_3800.p1 ORF type:complete len:228 (+),score=31.74,MatE|PF01554.14|5e-30,MatE|PF01554.14|3.7e+03 S_Transcript_3800:1759-2442(+)
MLCLELWYSTVVILMVGRLPNPQVAIDAISIGMNVEVWTLMITLGFNAAVSVRVSNEIGAVNPRAAKFSAAVTTATSTLFGIIFVAITIATKNHFPNMFTTDPTVIKETSKLGYFLSVIILINSVQAGLQGVAVGAGWQARVAVISIICYYIVGLPVGCLLSFNFNLGVQGIWLGVCTGMVLQTAVLLLMLYRTNWSQEALQAEERVQSWSSSPSTLPQPPQNSCKI*

Click here to download the sequence:
Link to NCBI Protein BLAST