Transcript Information: S_Transcript_380288.p1


Annotated TAIR IDAT5G04870.1
Annotated Gene Namecalcium dependent protein kinase 1
Annotated Gene Symbol(s)CPK1, ATCPK1
Annotation TypeOrtholog
Chromosome Positionchr5:1417015-1419877 | Reverse length=610
E-Value1.1E-285
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29617012503381
Replicate 20.45598770150667
Replicate 30.29320725093165
Condition 2: 8 Hour
Replicate 10.44074733564822
Replicate 20.21340396158722
Replicate 30.47443857944315
Condition 3: 24 Hour
Replicate 10.55567271200239
Replicate 20.46840946024247
Replicate 30.12029591926128


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_380288.p1 GENE.S_Transcript_380288~~S_Transcript_380288.p1 ORF type:complete len:629 (+),score=134.67,Pkinase|PF00069.21|9.3e-72,EF-hand_1|PF00036.28|6.3e+03,EF-hand_1|PF00036.28|3e-09,EF-hand_1|PF00036.28|0.0003,EF-hand_1|PF00036.28|6.3e-06,EF-hand_1|PF00036.28|2.6e-07,EF-hand_7|PF13499.2|3.4e-12,EF-hand_7|PF13499.2|4.9e-12,EF-hand_6|PF13405.2|8.1e-07,EF-hand_6|PF13405.2|0.11,EF-hand_6|PF13405.2|4.9e-07,EF-hand_6|PF13405.2|0.0041,Pkinase_Tyr|PF07714.13|3.1e-23,EF-hand_8|PF13833.2|0.00067,EF-hand_8|PF13833.2|7.3e-11,EF-hand_8|PF13833.2|0.91,EF-hand_8|PF13833.2|4.2e-09,EF-hand_5|PF13202.2|2.8e-06,EF-hand_5|PF13202.2|0.63,EF-hand_5|PF13202.2|0.00054,EF-hand_5|PF13202.2|0.0025,EF-hand_4|PF12763.3|75,EF-hand_4|PF12763.3|0.0012,EF-hand_4|PF12763.3|0.03,EF-hand_9|PF14658.2|0.0021,EF-hand_9|PF14658.2|10 S_Transcript_380288:770-2656(+)
ATGGGAAACAATTGCTTATCAAGTCTAGCGAAGGGCGCGTTTTGGTGCAAGCCACCAAAACAGATGATTGCTGAGAGTCAAAAAGGTGATGGAAAAGAAAAATCGTCAGTTGACAAGAATACTGATGGTCTTTCAGATGTTCAAATCAAACCTCCTGAGGTAGTGAAGGTTGGGAGTAAATTAGGAAGACAAGAAAGCCGACTAGGAAGACAAGAAAGTCGACTAGGAAGACAGGAGAGTCGTGTAGGGGCCAGGCAAGAAAGTCGACTAGGAAGACAAGAGAGCCGACTAGGGAGACAAGAAAGTCGGTTAGGGAGACAAGAGAGCAGGATGGGAAGACAAGAGAGCAGATTAACGCGACAAGAGAGCAAAGTACTGCAGCCTAATGTAGGAGGAGATGCTAAGAATAAACCGAATGTGAATGTGAAGAGGGTAGCAAGTGCAGGGTTGCAAGTACAATCAGTTTTGAGAAGAAAGACTGGCAACTTGAAGGATCATTACACCTTGGGGAAGAAACTCGGTCATGGTCAATTTGGGACGACTTTTCTCTGTGTGGAGAAATCCAGTGGGAAAGAATACGCTTGCAAGTCTATCGCCAAGCGGAAGTTGGTCAATAGAGAAGATGTCGAAGATGTGAGAAGGGAAATCGAGATTATGCATCACTTGAAAGGGTATCCTAATGTTATCACTATCAAGGATGCTTATGAAGATGCTGTGGCTGTTCATGTTGTCATGGAATTGTGTATTGGTGGTGAGCTTTTCGATAGAATTGTTAAGAGGGGGCATTATACTGAGAGGAAGGCGGCTGATCTTGCCAGGACTATCGTTGGTGTTGTGGAAGCTTGTCACTCTCTAGGAGTCATGCATCGTGATCTTAAGCCTGAAAACTTCCTGTTTGTGAATGAGGATGAGGATTCACATCTCAAGACTATTGACTTTGGTTTGTCGATATTCTTCAAGCCAGGGGATATTTTCCATGATGTCGTTGGAAGTCCATATTACGTAGCACCTGAGGTATTGCGTAAGCGCTATGGTCCTGAGGCTGATGTTTGGAGTGCAGGAGTTATCCTTTACATCCTCCTTAGTGGAGTACCTCCATTTTGGGCTGAAACGGAGGAAGAAATATTTGAAGAAGTCCTACATGGTGATCTTGACTTCACATCCGATCCATGGCCTAATATCTCCGAAGGTGCAAAGGACTTGGTCCGAAGAATGCTCATTAGAGACCCAAAGAAACGGCTAACAGCCCATGAAGTTCTCTGCCATCCCTGGATTATGACTGATGGTCTGGCTCCTGACAAGCCTCTTGATCATTCCGTCATAACTCGCTTGCAGCAGTTCTCTGCCATGAACAAACTTAAGAAAATGGCCCTTAGAGTCATCGCTGAGAGACTGTCAGAAGAGGAAATCGCAGGGCTGAAGGAAATGTTCAGGATGATAGACACAGACAACAGTGGGCAGATTACATTTGAAGAACTTAAAGAGGGACTCAAAAAGTTTGGTGCCAACCTCGAGGAGTCTGAGATTCACCATCTCATGAAATCAGCCGATGTTGATAATAGTGGGGCGATTGATTACGGGGAATTCATAGCTGCTATGTTGCATCTCCACAGAGTCGATAAGGAAGATCATCTACTTGCAGCTTTCACCTACTTTGACAAAGATCGAAGTGGCTATATTACACGAGATGAACTTCAACAAGCTTGTCAAGAGTTTGGTGTAGAGGAAATTCATTTGGAAGACATTATTAACGATGTGGACCAAGACAAAGATGGACGGATAGACTACAATGAGTTTGTTGCCATGATGCAAAGAGGAAATGTTGACTTGGGTAAAAAAGGTGTACAGAAACCTCTCAGTGTTGCAGTTCAAGAGGCACTTCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_380288.p1 GENE.S_Transcript_380288~~S_Transcript_380288.p1 ORF type:complete len:629 (+),score=134.67,Pkinase|PF00069.21|9.3e-72,EF-hand_1|PF00036.28|6.3e+03,EF-hand_1|PF00036.28|3e-09,EF-hand_1|PF00036.28|0.0003,EF-hand_1|PF00036.28|6.3e-06,EF-hand_1|PF00036.28|2.6e-07,EF-hand_7|PF13499.2|3.4e-12,EF-hand_7|PF13499.2|4.9e-12,EF-hand_6|PF13405.2|8.1e-07,EF-hand_6|PF13405.2|0.11,EF-hand_6|PF13405.2|4.9e-07,EF-hand_6|PF13405.2|0.0041,Pkinase_Tyr|PF07714.13|3.1e-23,EF-hand_8|PF13833.2|0.00067,EF-hand_8|PF13833.2|7.3e-11,EF-hand_8|PF13833.2|0.91,EF-hand_8|PF13833.2|4.2e-09,EF-hand_5|PF13202.2|2.8e-06,EF-hand_5|PF13202.2|0.63,EF-hand_5|PF13202.2|0.00054,EF-hand_5|PF13202.2|0.0025,EF-hand_4|PF12763.3|75,EF-hand_4|PF12763.3|0.0012,EF-hand_4|PF12763.3|0.03,EF-hand_9|PF14658.2|0.0021,EF-hand_9|PF14658.2|10 S_Transcript_380288:770-2656(+)
MGNNCLSSLAKGAFWCKPPKQMIAESQKGDGKEKSSVDKNTDGLSDVQIKPPEVVKVGSKLGRQESRLGRQESRLGRQESRVGARQESRLGRQESRLGRQESRLGRQESRMGRQESRLTRQESKVLQPNVGGDAKNKPNVNVKRVASAGLQVQSVLRRKTGNLKDHYTLGKKLGHGQFGTTFLCVEKSSGKEYACKSIAKRKLVNREDVEDVRREIEIMHHLKGYPNVITIKDAYEDAVAVHVVMELCIGGELFDRIVKRGHYTERKAADLARTIVGVVEACHSLGVMHRDLKPENFLFVNEDEDSHLKTIDFGLSIFFKPGDIFHDVVGSPYYVAPEVLRKRYGPEADVWSAGVILYILLSGVPPFWAETEEEIFEEVLHGDLDFTSDPWPNISEGAKDLVRRMLIRDPKKRLTAHEVLCHPWIMTDGLAPDKPLDHSVITRLQQFSAMNKLKKMALRVIAERLSEEEIAGLKEMFRMIDTDNSGQITFEELKEGLKKFGANLEESEIHHLMKSADVDNSGAIDYGEFIAAMLHLHRVDKEDHLLAAFTYFDKDRSGYITRDELQQACQEFGVEEIHLEDIINDVDQDKDGRIDYNEFVAMMQRGNVDLGKKGVQKPLSVAVQEALQ*

Click here to download the sequence:
Link to NCBI Protein BLAST