Transcript Information: S_Transcript_380301.p1


Annotated TAIR IDAT4G30150.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA processing, Urb2/Npa2 (InterPro:IPR018849); Has 58 Blast hits to 49 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 44; Viruses - 3; Other Eukaryotes - 7 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14742452-14749764 | Forward length=2009
E-Value7E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3024204685816
Replicate 20
Replicate 30.62872963921366
Condition 2: 8 Hour
Replicate 10.48466796175302
Replicate 20.25422555272417
Replicate 30.2422255409657
Condition 3: 24 Hour
Replicate 10
Replicate 20.51508662673517
Replicate 30.28661414096723


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_380301.p1 GENE.S_Transcript_380301~~S_Transcript_380301.p1 ORF type:internal len:88 (-),score=9.00 S_Transcript_380301:3-263(-)
GTATTTGATCTATACAGTGAGCTTCGTCAGGTGAATCATGCTGTTTTTACGCTGTGTAAGGGACTGAGGCACCTAGCATTCTATCAAGGAGACAATGAAATCAAATATTCGGAACTCTTGACACCTAAGGGAATCCTTCATTTTGCTAAATTTGCCAAATCAGGTCGATCATTATTATGCTCTCAAAAGTTTAGGCTGGCCATTTGCAATGCAATCAAATCTATACCTGAAGGGCAGGCCAGTGGATGTGTTCAAACTTTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_380301.p1 GENE.S_Transcript_380301~~S_Transcript_380301.p1 ORF type:internal len:88 (-),score=9.00 S_Transcript_380301:3-263(-)
VFDLYSELRQVNHAVFTLCKGLRHLAFYQGDNEIKYSELLTPKGILHFAKFAKSGRSLLCSQKFRLAICNAIKSIPEGQASGCVQTL

Click here to download the sequence:
Link to NCBI Protein BLAST