Transcript Information: S_Transcript_380728.p1


Annotated TAIR IDAT5G66500.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26548076-26549674 | Reverse length=532
E-Value3E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.1610422595439
Replicate 30.26923702311826
Condition 2: 8 Hour
Replicate 10.46697935001021
Replicate 20.65319266101392
Replicate 30.31118025700703
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.18410251390596


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_380728.p1 GENE.S_Transcript_380728~~S_Transcript_380728.p1 ORF type:5prime_partial len:137 (+),score=34.35,PPR_2|PF13041.2|7.6e-09,PPR_2|PF13041.2|50,PPR|PF01535.16|0.00049,PPR|PF01535.16|11,PPR|PF01535.16|2.8,PPR_3|PF13812.2|0.00032,PPR_3|PF13812.2|22,PPR_3|PF13812.2|1.8e+02 S_Transcript_380728:2-412(+)
TTGTTTCCAAACTCATCTCACTATGCTTGCTTTATCGACATCTTAGGACGAGCAGGGCATATCAATGAAGTTTGGTGTTTGTATGATGAGATGATTAAGAAAGGCATTAAGCCCACAGCTGCAGTGTGGGCAACATTGCTGAATGCTTGTGGACAGAACAATGATGTCTCAAGGGGCGAGTTTGCTGCAAAACAGCTTTCTGACTTGGAGCCTGATAAGCCTGGGATTTATGTTTTAGTATCAAATTTCTACGCAGCTATTGGGAAGTGGGATATTGTTGACCAACTAAGGCTTGAAATGAAGGAGAAGGGCTTGTTTAAGGATGCCGGAAGTAGCTGGTATACCATGTTTGGTGTCTCTGAATATGTTACTGAAAAGTCTGTGAAGTTTGATTCTGAATGTCCATTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_380728.p1 GENE.S_Transcript_380728~~S_Transcript_380728.p1 ORF type:5prime_partial len:137 (+),score=34.35,PPR_2|PF13041.2|7.6e-09,PPR_2|PF13041.2|50,PPR|PF01535.16|0.00049,PPR|PF01535.16|11,PPR|PF01535.16|2.8,PPR_3|PF13812.2|0.00032,PPR_3|PF13812.2|22,PPR_3|PF13812.2|1.8e+02 S_Transcript_380728:2-412(+)
LFPNSSHYACFIDILGRAGHINEVWCLYDEMIKKGIKPTAAVWATLLNACGQNNDVSRGEFAAKQLSDLEPDKPGIYVLVSNFYAAIGKWDIVDQLRLEMKEKGLFKDAGSSWYTMFGVSEYVTEKSVKFDSECPL*

Click here to download the sequence:
Link to NCBI Protein BLAST