Transcript Information: S_Transcript_380729.p1


Annotated TAIR IDAT5G66500.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26548076-26549674 | Reverse length=532
E-Value2E-109
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.080645458288426
Replicate 20
Replicate 30.055887079041214
Condition 2: 8 Hour
Replicate 10.32311197450202
Replicate 20.13558696145289
Replicate 30.38756086554511
Condition 3: 24 Hour
Replicate 10
Replicate 20.068678216898022
Replicate 30.53501306313883


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_380729.p1 GENE.S_Transcript_380729~~S_Transcript_380729.p1 ORF type:3prime_partial len:330 (+),score=29.02,PPR_2|PF13041.2|0.023,PPR_2|PF13041.2|0.15,PPR_2|PF13041.2|2.1e-10,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|0.0069,PPR|PF01535.16|4.1e+02,PPR|PF01535.16|0.0017,PPR|PF01535.16|3.8e-06,PPR|PF01535.16|1.2,PPR|PF01535.16|0.016,PPR_3|PF13812.2|0.37,PPR_3|PF13812.2|47,PPR_3|PF13812.2|4.9,PPR_3|PF13812.2|0.002,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|3.2e+03,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|0.62,PPR_1|PF12854.3|0.034,PPR_1|PF12854.3|20,PPR_1|PF12854.3|6.6 S_Transcript_380729:242-1228(+)
ATGTCCTTGTCCCGTTGCTTTCGTCGTTCGTTTCTATATCCCGCCAAGTCAAATATAATTACAAGTAATTCCAAACTTCCATACCCCGCCAATTTACCTGTAATTACCTGTAATTCCAAACTACCAGTCCACACTCAACCAAGTTCTGTGAAGTTTTTGCACTCCCGCCAACTGTTCGATGAAAAGCCTCAAAGAGACCTCTTTTCTCTCAACGCTCTCCTTGCTTCTCATTTTCGCAACAATGATCCTCTTGCTACATGGGCTCTCTTCCAACATTTACATTGCAATCGTACTGACCTTGACTCCCATACATTCACTCCGGTTATGGGTGCATGCTCGGTGTTACCTAATTCAAGACGAGGGTTTCAAGTTCATGCCCTTATGATCAAAATAGGTTCAGATATCGAAACTGTCCCAAAAACTGCTCTCATGGACATGTATTCCAAGTATGGTTTAGTGGATGAGCCGGTTCGAGTGTTTGACGAGATGGGTTCTAAGGATGTGGTCACTTGGAATGCTTTGCTTTCGAATTTTCTGCGAAATGACAAGCCTAGGAAAGCACTGGATGTGTTCGGGAAGATGAGGAACGAAAGGGTTGAATTTACTGAGTTTACTATCTGTTCTTTGCTTAAAGTTTGCTCCTCGTTGAAGGCGATGAGGCAGGGTATGCAAGTTCATGGCTTGGTTGCGACTATGGGCCGTGATAAGGTGGTTTTGGCGACTGCCCTTATTGACTTTTACTCAGATGTTGGACTGATTGACAAAGCTATGAAGATTTATTGGAGTTTAGATTGCCGAAAAGATAATGTTCTTCACAATTCCTTCATTGCTGCGTGTGTTAAGAATCAGAAGTATAAGGAAGCATTCTTGTTAATGAGTAGAATGAAGCCTAATATTGTGGCCTTAACTAGTGCTTTGACAGCTTGCTCCGAGAAATCAGATTTGCGGACCGGGAAGCAGATACATTGCGTGGCTATTCGATTTTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_380729.p1 GENE.S_Transcript_380729~~S_Transcript_380729.p1 ORF type:3prime_partial len:330 (+),score=29.02,PPR_2|PF13041.2|0.023,PPR_2|PF13041.2|0.15,PPR_2|PF13041.2|2.1e-10,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|0.0069,PPR|PF01535.16|4.1e+02,PPR|PF01535.16|0.0017,PPR|PF01535.16|3.8e-06,PPR|PF01535.16|1.2,PPR|PF01535.16|0.016,PPR_3|PF13812.2|0.37,PPR_3|PF13812.2|47,PPR_3|PF13812.2|4.9,PPR_3|PF13812.2|0.002,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|3.2e+03,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|0.62,PPR_1|PF12854.3|0.034,PPR_1|PF12854.3|20,PPR_1|PF12854.3|6.6 S_Transcript_380729:242-1228(+)
MSLSRCFRRSFLYPAKSNIITSNSKLPYPANLPVITCNSKLPVHTQPSSVKFLHSRQLFDEKPQRDLFSLNALLASHFRNNDPLATWALFQHLHCNRTDLDSHTFTPVMGACSVLPNSRRGFQVHALMIKIGSDIETVPKTALMDMYSKYGLVDEPVRVFDEMGSKDVVTWNALLSNFLRNDKPRKALDVFGKMRNERVEFTEFTICSLLKVCSSLKAMRQGMQVHGLVATMGRDKVVLATALIDFYSDVGLIDKAMKIYWSLDCRKDNVLHNSFIAACVKNQKYKEAFLLMSRMKPNIVALTSALTACSEKSDLRTGKQIHCVAIRFW

Click here to download the sequence:
Link to NCBI Protein BLAST