Transcript Information: S_Transcript_380794.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value1E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43669982721821
Replicate 20.29814580483128
Replicate 30.28482990090503
Condition 2: 8 Hour
Replicate 10.082337414351865
Replicate 20.10797224246972
Replicate 30.14402599733096
Condition 3: 24 Hour
Replicate 10.21085794875091
Replicate 20.41564905400637
Replicate 30.55994886227574


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_380794.p1 GENE.S_Transcript_380794~~S_Transcript_380794.p1 ORF type:complete len:1036 (+),score=118.20,RVT_1|PF00078.23|3.2e-43,RVT_3|PF13456.2|5.2e-18,zf-RVT|PF13966.2|2.8e-16 S_Transcript_380794:1366-4473(+)
ATGATGGCATATCAGAAAGCAAGATATGATAAAATTCAGTTTGGTGACAGGAATACATCATTCTTCCACACCATGACCCTCATTCGAAGGAGGAAAAACAAGGTGGAAGGCCTCTTAAATGACCAGGATGAGTGGGTTTGGGACCCGAATCAATTACGGGATATGGCAACGGACTTTTACAGGAAGCTATACCAGAAAGATGAGGCACTCCACTTGAACGTTCTTCCAAACCTTTGTTTTCCGGTCTTAACAAAGGATCTTCTGGACCCTCTTTTTGAACCATATTCTTGTGAAGAGATCAGAAAGGCACTTTTTGCTATGGCTCCTCATAAAGCCCCGGGTCCCGACGGATTCCATGCGGTCTTCTTTCAAAAGATGTGGAACGTAGTGGGGAAATCCATATGTGACTTTGCACTTGAATTCTTCAGACTCAATCACTTACCAGAAGGGATGAATGATACTCTCCTGGTTCTTATACCCAAGGTCCCTGACCCTGAGAGACTCACGCAGATGAGGCCCATTTCTCTGTGCAACGTGACTTACAAAATACTCACCAAGGTGTTGGCTAACCGAATTAAGGGTATTCTTCCTAAGCTCATATCCCCAGCTCAAGCAAGCTTTGTTCCAGGCCGACAAATATCAGACAATATTGTGATAACGCAAGAGGTTATTCATGCTATGAAGAAGCGAACAATTGGGGCAGGATGGATGGAAATAAAAATCGATCTCGAGAAGGCATATGATCGGCTCAAGTGGGAATCTATCTATGATACCCTTATGGATCTTCCTTTTCCAGTAAGCATGATTGGTGCAATTATGTCTTGCGTTCAAGGAGCGCGAATGCGACTGTTATGGAATGGGGAAAAGACTGACATCTTTGAGCCCACCAGAGGTATTCGTCAAGGAGACCCTCTCTCCCCTTACCTCTTTGTCCTTTGCATGGAGCGACTAGCTCATCGTATTCAAATGTCAGTGGACGATAAGAAATGGAAGACTATTCGACTGTCGCGAAAATCGCCTCCCTTGAGTCACCTCTTTTTTGCTGACGACCTCATTCTTTTTGCTGAGGCTGGCCCTGATCAAGTGGATGTGATTCTCACATGTCTCGAGGATTTCTGCATCTCCTCCGGGCAAAAAGTAAATAAGCAAAAGTCAGCTATTTATTTCTCTAAAGGAGTATCCTCACATCTGCGACAACAAGTGAGTGACGGGTTGGGTATCCCCATAACTGATAACTTGGGAAATTATCTTGGAGTTCCCATCTTACATAATCGAGTGGGCAAGAACTCATACAAGTACATCATTGATAAGGTCAACAAACGCCTGACGGGTTGGAAAGCCCAGCATCTTAGCTTTCCAGGGCGCCTCACTTTGGTGAAATCCGTCACTTCCACAATCCCTAATCATGTGATGCAAACAGTTCATCTACCCATCTCGGTTTGCAACGAGCTGGACCAGAAAAATCGCGACTTCCTTTGGGGGGATATGCAGGATAATAAGAGGCCTCACTTGGTCAATTGGAATCAGATTTGTCGTCCAAAATATGTTGGTGGGTTGGGTCTTCGCTCGGCCCGACAAGCTAACAGAGCATTGCTCTCAAAGCTGGGATGGAGATTGTTGAAGGAACCTGAAGCCCTTTGGTCACGAGTGCTCAAGGCCAAATATGGGGGTGACCGTAGCGGGGTATATATGTTCAAACCAATTGTTGGGGCCTCACCAGTTTGGAGGGGGCTAAATAAATGTACTCCAATTTTACAACAAGGAGTAGGGTGGAATGTTACCAATGGCAGCGTTGCTCGCTTTTGGCTTGACAAATGGATGGGGCCTGATACTCTTCTTTCTCAAGCCACTTGTGAGATCGAGGAGGAAGAGCGCCAGTGTAGAGTGGCAGATTACTGGGATGACTCTCAGGGATGGAAGTGGGAGGCTTTCAGCGCCAAACTCCCTGCCATCACCCTTTTAAAAATAGCATCCATCCACCTCAGACTGAACTTCCTTACGCCAGACACTACGGTATGGATGCGTAGCACTAAGGGCTGCTTCTCAACCTCCTCAGCTTTTGATATTATCAGGCCTCGAGACAAAGACATTGTGGATCGCATCTGGAAAAGTATATGGGAGGTGTCTTGCCCAGAAAGATTTCGCACCTTTGCATGGCTAGTGGCGCATGATAGGATACTTACAAATGCCGCTCGTTGTTCTCGTGGGATGACGGACTCTCCCAATTGTACTTACTGTGAGGGTCATTGGGAAGATACCCTCCATGTCTTGCGAGATTGTTTTGCTGCTTCATCTATATGGAACAAATTGGTTGCCCCTAATGCCCGAGTGGATTTCTACACTTGGAACCTAAGAGATTGGATGTACAGGAACTGTACTTCACAGTTGGGGGTTAATCCTTGTTGGGACTGGCCCAGAGTTTTTCTAACCACAATGTGGTTCATCTGGAGATTGAGATGCTACAGAGTCTTTGGGGGACATATGCACATCCCCTTCAATCAAATTAGCTTCTTATACAAGCAATTCCAGGACATTTCCAAGGCCCTGGATGGGGATGAACGTGATACAGGACCACCCAAGGTTTTGACTTTCATCCGATGGCAGTACCCACCATCCTCGTGGGTAAAATTAAATACAGATGGCGCGGCGAAGGGCAATCCAGGAGCGGCAAGTGCAGGAGGGGTTGCTCGAGACTCATTGGGTCAGTGGATTCAAGGCTTTGCACACCACATTGGTGTGTGCACCTCGGTGGCTGCTGAGTTATGGGGTGTATTTACAGGGTTGAAGATGGCATGGGATCTGGGCTTTAGGAAACTAATCCTTGAAGTGGACTCAATGGTAGTCAAGAGCATGGTTTCGGAAGACATTGACTGGAGTGGACCGAATGCTAATCTTATAGCTCTTTGCCAGCAGGAGCTTGGGAAGGAATGGGAGATACAAGTCGAGCATGTATATCGCGAAGCTAATGGAGTAGCTGATGCACTAGCAAACAAGGCTTTGGAGTTGGAACAAGGGGTACACTTCTTTGATAGTCCTCCTTCAGGAGTTGCTTCTTTGGTTTTTCAAGACCTGAGCGGGGTGTCTTTCCCTCGCCTAATTAGAATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_380794.p1 GENE.S_Transcript_380794~~S_Transcript_380794.p1 ORF type:complete len:1036 (+),score=118.20,RVT_1|PF00078.23|3.2e-43,RVT_3|PF13456.2|5.2e-18,zf-RVT|PF13966.2|2.8e-16 S_Transcript_380794:1366-4473(+)
MMAYQKARYDKIQFGDRNTSFFHTMTLIRRRKNKVEGLLNDQDEWVWDPNQLRDMATDFYRKLYQKDEALHLNVLPNLCFPVLTKDLLDPLFEPYSCEEIRKALFAMAPHKAPGPDGFHAVFFQKMWNVVGKSICDFALEFFRLNHLPEGMNDTLLVLIPKVPDPERLTQMRPISLCNVTYKILTKVLANRIKGILPKLISPAQASFVPGRQISDNIVITQEVIHAMKKRTIGAGWMEIKIDLEKAYDRLKWESIYDTLMDLPFPVSMIGAIMSCVQGARMRLLWNGEKTDIFEPTRGIRQGDPLSPYLFVLCMERLAHRIQMSVDDKKWKTIRLSRKSPPLSHLFFADDLILFAEAGPDQVDVILTCLEDFCISSGQKVNKQKSAIYFSKGVSSHLRQQVSDGLGIPITDNLGNYLGVPILHNRVGKNSYKYIIDKVNKRLTGWKAQHLSFPGRLTLVKSVTSTIPNHVMQTVHLPISVCNELDQKNRDFLWGDMQDNKRPHLVNWNQICRPKYVGGLGLRSARQANRALLSKLGWRLLKEPEALWSRVLKAKYGGDRSGVYMFKPIVGASPVWRGLNKCTPILQQGVGWNVTNGSVARFWLDKWMGPDTLLSQATCEIEEEERQCRVADYWDDSQGWKWEAFSAKLPAITLLKIASIHLRLNFLTPDTTVWMRSTKGCFSTSSAFDIIRPRDKDIVDRIWKSIWEVSCPERFRTFAWLVAHDRILTNAARCSRGMTDSPNCTYCEGHWEDTLHVLRDCFAASSIWNKLVAPNARVDFYTWNLRDWMYRNCTSQLGVNPCWDWPRVFLTTMWFIWRLRCYRVFGGHMHIPFNQISFLYKQFQDISKALDGDERDTGPPKVLTFIRWQYPPSSWVKLNTDGAAKGNPGAASAGGVARDSLGQWIQGFAHHIGVCTSVAAELWGVFTGLKMAWDLGFRKLILEVDSMVVKSMVSEDIDWSGPNANLIALCQQELGKEWEIQVEHVYREANGVADALANKALELEQGVHFFDSPPSGVASLVFQDLSGVSFPRLIRM*

Click here to download the sequence:
Link to NCBI Protein BLAST