Transcript Information: S_Transcript_38094.p1


Annotated TAIR IDAT4G13710.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7962550-7966012 | Forward length=470
E-Value5.9E-220
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.94022991926
Replicate 224.501308403345
Replicate 324.606492616804
Condition 2: 8 Hour
Replicate 154.604223101501
Replicate 248.393841004882
Replicate 353.906656706282
Condition 3: 24 Hour
Replicate 17.4732496152033
Replicate 215.268252009329
Replicate 317.655431083581


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38094.p1 GENE.S_Transcript_38094~~S_Transcript_38094.p1 ORF type:3prime_partial len:380 (+),score=71.12,Pec_lyase_C|PF00544.15|4.2e-19,Beta_helix|PF13229.2|2.6e-07 S_Transcript_38094:1007-2143(+)
ATGACGATAATGTCTTCTACTAAGACATCATGGATTGCTTCTCTGTCTTCTGTTTTAGTTCTTCTTCTCCTTTTTGCTGCTCTTGTGGCTTCCAGGTCAGTACAAACAACAGAGAACTCAAAGAGCTCAAATTCCACAACAATGGCGATCCAGCAGGTGAAGGAGGTGGAAGCCATAAATGAACATGGCCATGCTGTGGATGACCCTGAAGAGGTTGTTTCAATGGTTCACATGAGTATCCGGAACAGTACTGAGAGGAGGAAGCTGGGTTACTTCTCATGTGGGACGGGGAACCCCATTGATGACTGCTGGCGTTGTGACAACGACTGGCACAAAAACCGCAAGCGCCTGGCTGACTGTGGTATTGGTTTTGGAAGAAATGCCATTGGTGGTCGGAATGGCCGTTTCTATGTTGTCACAGACCCTACTGATGATGACCCTGTCAACCCTAAGCCTGGAACTCTCCGCCATGCAGTCATCCAGGAGGAACCTCTTTGGATTGTGTTCGAACGTGACATGGTGATCCGGTTGAAGGAGGAGCTCATAATGAACAGCTTCAAGACAATCGATGGTCGTGGAGCCAACATCCACATTGCTAATGGGGCTTGCATCACGATTCAATATGTAACGAACATTATTATTCATGGCATCCACATCCATGATTGCAAACCCACTGGCAATGCTATGGTCAGGAGCAGCCCTTCTCATTATGGATGGAGGACCATGGCTGATGGAGATGGCATCTCAATTTTTGGAGGGAGTCATATTTGGATTGATCACAATTCACTCTCCCACTGTGCTGATGGCCTCGTCGATGCTATCATGGGGTCAACCGCCATTACTATTTCCAACAATCACTTTGCCCACCATAATGAGGTGATGTTGTTGGGACACAGTGACTCTTATGTAAAAGACAAGCAAATGCAAGTTACTATTGCTTTCAACCACTTTGGTGCAGGCCTCATCCAGAGAATGCCAAGGTGTCGACATGGTTATTTCCACGTCGTGAACAATGACTACACCCACTGGGAAATGTATGCCATTGGTGGAAGCGCAAACCCCACCATCAACAGCCAGGGGAACAGATACCTTGCCCCTGCAAACCCTTTTGCAAAGGAGGTCACAAAGCGAGTAGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38094.p1 GENE.S_Transcript_38094~~S_Transcript_38094.p1 ORF type:3prime_partial len:380 (+),score=71.12,Pec_lyase_C|PF00544.15|4.2e-19,Beta_helix|PF13229.2|2.6e-07 S_Transcript_38094:1007-2143(+)
MTIMSSTKTSWIASLSSVLVLLLLFAALVASRSVQTTENSKSSNSTTMAIQQVKEVEAINEHGHAVDDPEEVVSMVHMSIRNSTERRKLGYFSCGTGNPIDDCWRCDNDWHKNRKRLADCGIGFGRNAIGGRNGRFYVVTDPTDDDPVNPKPGTLRHAVIQEEPLWIVFERDMVIRLKEELIMNSFKTIDGRGANIHIANGACITIQYVTNIIIHGIHIHDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGGSHIWIDHNSLSHCADGLVDAIMGSTAITISNNHFAHHNEVMLLGHSDSYVKDKQMQVTIAFNHFGAGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYLAPANPFAKEVTKRVD

Click here to download the sequence:
Link to NCBI Protein BLAST