Transcript Information: S_Transcript_381069.p1


Annotated TAIR IDAT3G14172.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:4698860-4704773 | Reverse length=1270
E-Value3E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.48387274973055
Replicate 20.60171244247768
Replicate 30.16766123712364
Condition 2: 8 Hour
Replicate 10
Replicate 20.610141326538
Replicate 30.38756086554511
Condition 3: 24 Hour
Replicate 10
Replicate 20.6181039520822
Replicate 30.45858262554757


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_381069.p1 GENE.S_Transcript_381069~~S_Transcript_381069.p1 ORF type:internal len:110 (-),score=25.57 S_Transcript_381069:3-329(-)
GACGAGAAAGAGGAAATCATGGGACATGGTTCTCTTGTTCAACTTCTGGAGCACTTACCCAACGTAAAGGATCAACTTGCTGAAGGATCTCGTAGCTGTAGATCAGAGTCACCAGGCAATGTAAATCGAGAGGCATGGTTCACAAAAGCCACATTACAAAGGTTTCTTCATATAGTTGGTTCACCTGATTCGCTAAAGAAATCTGTTGCTATAAGCAATGAGATGTCCCAGTTGAAGGAAACAAGAAAGTTTCACCTTTCTTTATATCAAAAGGCTGGAGATGGGATTATGTCATCTGATAATTCAAAGAATGAGTTGCTGCGGGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_381069.p1 GENE.S_Transcript_381069~~S_Transcript_381069.p1 ORF type:internal len:110 (-),score=25.57 S_Transcript_381069:3-329(-)
DEKEEIMGHGSLVQLLEHLPNVKDQLAEGSRSCRSESPGNVNREAWFTKATLQRFLHIVGSPDSLKKSVAISNEMSQLKETRKFHLSLYQKAGDGIMSSDNSKNELLRA

Click here to download the sequence:
Link to NCBI Protein BLAST