Transcript Information: S_Transcript_381208.p2


Annotated TAIR IDAT1G48930.1
Annotated Gene Nameglycosyl hydrolase 9C1
Annotated Gene Symbol(s)AtGH9C1, GH9C1
Annotation TypeOrtholog
Chromosome Positionchr1:18101782-18104587 | Reverse length=627
E-Value2.9E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31126317234129
Replicate 20.51608864462023
Replicate 30.53926128899417
Condition 2: 8 Hour
Replicate 10.62354942447757
Replicate 20.52331809683571
Replicate 30
Condition 3: 24 Hour
Replicate 10.25549571334028
Replicate 20.1325369098032
Replicate 30.58998934280973


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_381208.p2 GENE.S_Transcript_381208~~S_Transcript_381208.p2 ORF type:5prime_partial len:171 (+),score=23.68,Glyco_hydro_9|PF00759.15|1.3e-50 S_Transcript_381208:1-513(+)
AAAGAATCCAAATTAGCTTCGAGATTATTGAGAGAGATGAATTTGGTTCTACATCGAAGAAAAAAGCAAGAGTTCTTGTTGAGCACAACTGCGACCACCAACTTCGACTATGGTGATACACTTGACAAGAGCTTGCTGTTTTTCGAGGCTCAGAGATCTGGTAGACTTCCCTCCAATCGTAGAGTTTCTTGGCGCGGTGATTCTGGCCTCAACGATGGATTTTCACAAAATGTGGACTTAGTGGGCGGGTACTATTATGCAGGGGACCATGTTAAGTTTGGGCTTCCAATGGCATATAGTATGACTCTACTCGCTTGGGCGGCTGTAGATTACAGGAGAGAGATTTTAGGAACACATCAGATGGAACATACTCTTGACGCCATTCGTTGGGGGACTGATTACTTCATCAAGGCACACTGTGAGACTAATGTTCTTTGGGCCCAGGTAGGAGATGGAGAAGCTGATCACAGTTGCTGGGAGCGTGCTGAGGACATGACGACACCCAGGGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_381208.p2 GENE.S_Transcript_381208~~S_Transcript_381208.p2 ORF type:5prime_partial len:171 (+),score=23.68,Glyco_hydro_9|PF00759.15|1.3e-50 S_Transcript_381208:1-513(+)
KESKLASRLLREMNLVLHRRKKQEFLLSTTATTNFDYGDTLDKSLLFFEAQRSGRLPSNRRVSWRGDSGLNDGFSQNVDLVGGYYYAGDHVKFGLPMAYSMTLLAWAAVDYRREILGTHQMEHTLDAIRWGTDYFIKAHCETNVLWAQVGDGEADHSCWERAEDMTTPRA*

Click here to download the sequence:
Link to NCBI Protein BLAST