Transcript Information: S_Transcript_381818.p1


Annotated TAIR IDAT5G16486.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5383597-5384226 | Reverse length=209
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.20046452264783
Condition 2: 8 Hour
Replicate 10.69539316251521
Replicate 20.48634453564623
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.24634577800378
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_381818.p1 GENE.S_Transcript_381818~~S_Transcript_381818.p1 ORF type:5prime_partial len:184 (+),score=28.27,zf-RVT|PF13966.2|9.3e+03,zf-RVT|PF13966.2|1e-16 S_Transcript_381818:1-552(+)
CTTGTTGCCTGGAAGAAGCTTTGTCAGGAGAAGAAGTATGGTGGTATCCACATTAAAGAAGTTTTAAGCTGGAATAAGAGCTTGCTGATCAAATGGATTACTAAAGTCCATAATAGGACTGACTCTTTGTGGGTAAACTGGGTTAATGCCTACTATCTTAAAGGTACCAGTGTTTGGGATATTAAAACCAAGCATGGAGACTCATGGGCTTGGAAATCTATCTTGAAGATCAGAGATGAGTTTATGAGTATAGTCGGAGGAATGAATGCTGCCATCCAAGCCTTACAGCTTAAGAGAGCTGGCGACTCCACAACAACAAAAGTCTACCAGATCTTCAAAGGGCAACATATGCAGGTTCCATGGACAAATATTGTATGGGACTCTATCAATCTTCCCAAGCATGCAATTATAACAGTACTTGATATGCATAATGCACTTCCTACCATTGATAATCTTGCCAAAAGAGGAATGCATCTTGTCAATAGATGTATTTTGTGCAAACAACAGCAGGAGACTAGAGACCATCTCTTCTTTAATTGCACGTTTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_381818.p1 GENE.S_Transcript_381818~~S_Transcript_381818.p1 ORF type:5prime_partial len:184 (+),score=28.27,zf-RVT|PF13966.2|9.3e+03,zf-RVT|PF13966.2|1e-16 S_Transcript_381818:1-552(+)
LVAWKKLCQEKKYGGIHIKEVLSWNKSLLIKWITKVHNRTDSLWVNWVNAYYLKGTSVWDIKTKHGDSWAWKSILKIRDEFMSIVGGMNAAIQALQLKRAGDSTTTKVYQIFKGQHMQVPWTNIVWDSINLPKHAIITVLDMHNALPTIDNLAKRGMHLVNRCILCKQQQETRDHLFFNCTFA*

Click here to download the sequence:
Link to NCBI Protein BLAST