Transcript Information: S_Transcript_38205.p1


Annotated TAIR IDAT4G34110.1
Annotated Gene Namepoly(A) binding protein 2
Annotated Gene Symbol(s)PAB2, PABP2, ATPAB2
Annotation TypeOrtholog
Chromosome Positionchr4:16336732-16339892 | Forward length=629
E-Value2.9e-318
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1614.44129558918
Replicate 2599.77977985262
Replicate 3576.42645692553
Condition 2: 8 Hour
Replicate 1662.60803055177
Replicate 2650.41312304783
Replicate 3638.50505572433
Condition 3: 24 Hour
Replicate 1603.30330732749
Replicate 2581.38351244029
Replicate 3593.73228354562


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38205.p1 GENE.S_Transcript_38205~~S_Transcript_38205.p1 ORF type:complete len:659 (+),score=191.66,RRM_1|PF00076.18|2e-19,RRM_1|PF00076.18|6.2e-21,RRM_1|PF00076.18|3.2e-24,RRM_1|PF00076.18|8.7e+03,RRM_1|PF00076.18|8.6e-20,RRM_6|PF14259.2|5.3e-09,RRM_6|PF14259.2|4.5e-12,RRM_6|PF14259.2|9e-16,RRM_6|PF14259.2|1.3e-12,RRM_5|PF13893.2|1e-05,RRM_5|PF13893.2|3.1e-09,RRM_5|PF13893.2|5.5e-08,RRM_5|PF13893.2|9.6e-06,PABP|PF00658.14|7.6e+02,PABP|PF00658.14|4.4e-26,RRM_occluded|PF16842.1|2.1e+02,RRM_occluded|PF16842.1|32,RRM_occluded|PF16842.1|0.0032,RRM_occluded|PF16842.1|0.0021,Nup35_RRM|PF05172.9|4.2e+02,Nup35_RRM|PF05172.9|0.016,Nup35_RRM|PF05172.9|51,Nup35_RRM|PF05172.9|20,RRM_7|PF16367.1|10,RRM_7|PF16367.1|0.19,RRM_7|PF16367.1|18,RRM_7|PF16367.1|5.3e+02,Nup35_RRM_2|PF14605.2|8.1e+02,Nup35_RRM_2|PF14605.2|0.82,Nup35_RRM_2|PF14605.2|13,Nup35_RRM_2|PF14605.2|7,RRM_3|PF08777.7|1.1e+03,RRM_3|PF08777.7|0.21,RRM_3|PF08777.7|0.95,RRM_3|PF08777.7|20,RRM_3|PF08777.7|4.9e+03 S_Transcript_38205:687-2663(+)
ATGGCCCAGGTCCAGCTTCAACCAAATGGTGCGGTGGTGGGTCCCACTGCTGCCGGTGCCGGTGGTGGTGGGTCCACTGGTGGGCCCCAGTTCGTAACGGTGTCGCTTTATGTGGGGGATTTGGATTGGAATGTGACTGATTCACAACTGTACGATCTGTTCAATCAAGTCGGTCAAGTTCAATCTGTCAGGGTTTGCCGGGATTTGACTACTCGGAGATCACTTGGCTATGGTTATGTCAACTATAGTAGCCACCCAGATGCTGCAAGAGCCATAGAGGTGCTGAACTTTACTCCCCTCAATAACAAGCCTATCAGGATAATGTATTCTCACCGTGATCCTAGTATCCGTAAAAGTGGAGCTGGAAATATCTTTATCAAGAATTTGGACAGGGCCATTGACAACAAAGCATTGCATGAAACATTTTCTTCCTTCGGGAACATTCTCTCTTGCAAAGTTGCTACAGAAGCATCAGGCCAGTCAAAAGGTTATGGTTTTGTGCAGTATGATAATGAGGAATCTGCCCAAAAAGCAATAGAGAAGCTGAATGGCATGCTGTTGAATGACAAGCAAGTCTATGTTGGACCGTTCCTGCGCAGGCAGGAAAGAGAAAATTTTACTGACAAAACAAGGTTCACCAATGTGTTTGTTAAGAATCTTGCTGAGTCGACAACAGATGAAGATTTGAACAATACTTTTAGCCAATATGGGAAAATTACGAGTGCTGTTGTGATGCGTGATGTAGATGGGAAATCAAAATGCTTTGGCTTTGTGAACTTTGAAGATGCAGATGACGCTGCTAAGGCTGTGGAAGCTCTGAATGGGCAGAAGTTTGATGACAAGGAGTGGTTTGTTGGTAAAGCCCAGAAAAAGGCTGAAAGGGAAGCTGAACTGAAGCATCGATTTGAGCAGAGTATGAAAGAAGCAGTGGACAAATACCAAGGAACTAACCTCTACATTAAAAATTTAGATGATACCATAGATGATGAGAAGCTCAGAGAGTTATTTGCTCAATTTGGTACAATTACTTCATGCAAGGTCATGCGAGATCCTACTGGTGTAAGCAAGGGATCAGGTTTTGTTGCATTTTCGACTGCTGAAGAGGCATCTCGAGCTTTAATGGAGATGAATGGCAAGATGATTGTTAGCAAGCCTCTTTATGTTGCTCTTGCTCAACGTAAAGAAGATAGAAGAGCAAGGCTACAGGCCCAGTTCTCGCAAATGCGTCCTGTTGCAATGCCACCATCTGTTGCTCCTAGGATGCCCATGTATCCACCTGGTGGTCCGGGGCTTGGAGGACAGCTATATTATGGCCAAGCACCTCCTGCTATTATTCCGCCTCAGCCTGCATTTGGATATCAACATCAGCTCATGCCTGGGATGAGGGGCGGCGCTCCGGTGCCAAATTTCTTTGTCCCTATGGTCCAGCAAGGGCAGCAGGGTCAACGGCCTGGTGGCAGGCGTGCAGGTGGTGCTCCTGTCCAGCAACCCCAGCAGCCCATTCCTATGATGCAGCAGCAGATGCTGCCAAGGGGACGTTATCGCTACCCCCCAGCACGTGGGCTGCCAGATGCTCCTATCCCAGGTGTTACTGGAGGTGTGCTTCCTGGTGTTCAATATGACATGGGTGGAGTGCAAATTCGTGACCTGTCTCCAACTGTGCCAGTTGGCACTTTAGCTACCCTGCTTGCTAATGCTACTCCTGAGCAGCAGAGGCTGCTTTTGGGAGAGAACCTGTATCCGTTGGTGGAGCAGTTGGAGCCGGAAATGGCAGCTAAAGTGACTGGAATGCTGCTTGAGATGGACCAAACTGAAGTACTCCACTTGCTGGAGTCTCCAGATGCACTGAAGGCCAAGGTTGCCGAGGCCATGGAAGTCTTGAGGAATGTCGCTCAGCAACAACAGCAGCAGCAGCAACCGCCGAGCAACCCTGCTGACCAGCTTGCTGCCTTGTCATTGAATGACAACCTATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38205.p1 GENE.S_Transcript_38205~~S_Transcript_38205.p1 ORF type:complete len:659 (+),score=191.66,RRM_1|PF00076.18|2e-19,RRM_1|PF00076.18|6.2e-21,RRM_1|PF00076.18|3.2e-24,RRM_1|PF00076.18|8.7e+03,RRM_1|PF00076.18|8.6e-20,RRM_6|PF14259.2|5.3e-09,RRM_6|PF14259.2|4.5e-12,RRM_6|PF14259.2|9e-16,RRM_6|PF14259.2|1.3e-12,RRM_5|PF13893.2|1e-05,RRM_5|PF13893.2|3.1e-09,RRM_5|PF13893.2|5.5e-08,RRM_5|PF13893.2|9.6e-06,PABP|PF00658.14|7.6e+02,PABP|PF00658.14|4.4e-26,RRM_occluded|PF16842.1|2.1e+02,RRM_occluded|PF16842.1|32,RRM_occluded|PF16842.1|0.0032,RRM_occluded|PF16842.1|0.0021,Nup35_RRM|PF05172.9|4.2e+02,Nup35_RRM|PF05172.9|0.016,Nup35_RRM|PF05172.9|51,Nup35_RRM|PF05172.9|20,RRM_7|PF16367.1|10,RRM_7|PF16367.1|0.19,RRM_7|PF16367.1|18,RRM_7|PF16367.1|5.3e+02,Nup35_RRM_2|PF14605.2|8.1e+02,Nup35_RRM_2|PF14605.2|0.82,Nup35_RRM_2|PF14605.2|13,Nup35_RRM_2|PF14605.2|7,RRM_3|PF08777.7|1.1e+03,RRM_3|PF08777.7|0.21,RRM_3|PF08777.7|0.95,RRM_3|PF08777.7|20,RRM_3|PF08777.7|4.9e+03 S_Transcript_38205:687-2663(+)
MAQVQLQPNGAVVGPTAAGAGGGGSTGGPQFVTVSLYVGDLDWNVTDSQLYDLFNQVGQVQSVRVCRDLTTRRSLGYGYVNYSSHPDAARAIEVLNFTPLNNKPIRIMYSHRDPSIRKSGAGNIFIKNLDRAIDNKALHETFSSFGNILSCKVATEASGQSKGYGFVQYDNEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERENFTDKTRFTNVFVKNLAESTTDEDLNNTFSQYGKITSAVVMRDVDGKSKCFGFVNFEDADDAAKAVEALNGQKFDDKEWFVGKAQKKAEREAELKHRFEQSMKEAVDKYQGTNLYIKNLDDTIDDEKLRELFAQFGTITSCKVMRDPTGVSKGSGFVAFSTAEEASRALMEMNGKMIVSKPLYVALAQRKEDRRARLQAQFSQMRPVAMPPSVAPRMPMYPPGGPGLGGQLYYGQAPPAIIPPQPAFGYQHQLMPGMRGGAPVPNFFVPMVQQGQQGQRPGGRRAGGAPVQQPQQPIPMMQQQMLPRGRYRYPPARGLPDAPIPGVTGGVLPGVQYDMGGVQIRDLSPTVPVGTLATLLANATPEQQRLLLGENLYPLVEQLEPEMAAKVTGMLLEMDQTEVLHLLESPDALKAKVAEAMEVLRNVAQQQQQQQQPPSNPADQLAALSLNDNLS*

Click here to download the sequence:
Link to NCBI Protein BLAST