Transcript Information: S_Transcript_38210.p1


Annotated TAIR IDAT1G75560.1
Annotated Gene Namezinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28371420-28372717 | Reverse length=257
E-Value9.8E-112
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.565847294013
Replicate 222.147646440428
Replicate 319.364872887781
Condition 2: 8 Hour
Replicate 131.988085475699
Replicate 233.729864102972
Replicate 335.581068694469
Condition 3: 24 Hour
Replicate 119.576376358879
Replicate 217.172195694386
Replicate 321.341729881252


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38210.p1 GENE.S_Transcript_38210~~S_Transcript_38210.p1 ORF type:complete len:260 (+),score=33.81,zf-CCHC|PF00098.19|3e-06,zf-CCHC|PF00098.19|0.00076,zf-CCHC|PF00098.19|0.00075,zf-CCHC|PF00098.19|0.0078,zf-CCHC|PF00098.19|0.012,zf-CCHC|PF00098.19|2.5e-05,zf-CCHC|PF00098.19|0.00031,zf-CCHC|PF00098.19|0.075,zf-CCHC|PF00098.19|0.00081,zf-CCHC_4|PF14392.2|1.5,zf-CCHC_4|PF14392.2|0.18,zf-CCHC_4|PF14392.2|4.8,zf-CCHC_4|PF14392.2|0.25,zf-CCHC_4|PF14392.2|21,zf-CCHC_4|PF14392.2|0.58,zf-CCHC_4|PF14392.2|0.084,zf-CCHC_4|PF14392.2|7.9e+03,zf-CCHC_4|PF14392.2|0.52,zf-CCHC_3|PF13917.2|0.049,zf-CCHC_3|PF13917.2|0.85,zf-CCHC_3|PF13917.2|74,zf-CCHC_3|PF13917.2|1.9,zf-CCHC_3|PF13917.2|0.69,zf-CCHC_3|PF13917.2|0.00074,zf-CCHC_2|PF13696.2|0.0026,zf-CCHC_2|PF13696.2|15,zf-CCHC_2|PF13696.2|6e+02,zf-CCHC_2|PF13696.2|20,zf-CCHC_2|PF13696.2|1.4,zf-CCHC_2|PF13696.2|2,zf-CCHC_2|PF13696.2|0.0027,zf-CCHC_2|PF13696.2|0.11 S_Transcript_38210:240-1019(+)
ATGAGCAGAGACAGTATGAGCAGGAGCGGGAGCACTAGCAGGAGTAGGAGTCGAAGCCAGAGCCCTATGAATCGAAAGTTTCGCACTGAGCGCCATTCTCATCGAACTGCTCCTTATGTGAGAGAGGCGCGTCAGGGTGTCAGCCAGATCAACTTATGCAAGAATTGCAAGCGCCCGGGTCACTTTGCTAGAGAATGCCCTAATGTGGGCATATGTCATAATTGCGGTCTTCCTGGGCATATTGCTCTGGAATGTACCACAAAATCTCTTTGTTGGAACTGTCGAGAACCTGGTCACACAGCCGGTAACTGCCCTAATGAGGGCATCTGCCATAGATGTGGCCTGGGTGGTCACCAGGCCAGGGACTGTTCTGCTCCCCCCCCACCACCACCAGATGATGCAAGGATGTGTAACAACTGTTACAAGCAAGGCCATATAGCAGCGGATTGTACCAATGACAAGGCCTGCAACAATTGTAGGAGGACAGGTCACTTGGCTCGGGACTGTAAAAATGAACCTGTATGCAACCTGTGCAATGTGTCGGGACATGTTGCAAAAGACTGTCCTAAGGCTGATGTTTTGGCTGGGAGAGGGGGTGGGATCCGTGGTGGCCCTCGTGGTGGTTTCCGAGATGTTGTATGCAGAAACTACCAGCAGCTAGGTCATATGAGCAGGGACTGCATCGCGCCTGTAATATGCCATATGTGTGGAGGGCGTGGTCATCTGGCATTTGAATGCCCTTCTGGGAGGTACTTGGACCGTTATCCTAGGAGGTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38210.p1 GENE.S_Transcript_38210~~S_Transcript_38210.p1 ORF type:complete len:260 (+),score=33.81,zf-CCHC|PF00098.19|3e-06,zf-CCHC|PF00098.19|0.00076,zf-CCHC|PF00098.19|0.00075,zf-CCHC|PF00098.19|0.0078,zf-CCHC|PF00098.19|0.012,zf-CCHC|PF00098.19|2.5e-05,zf-CCHC|PF00098.19|0.00031,zf-CCHC|PF00098.19|0.075,zf-CCHC|PF00098.19|0.00081,zf-CCHC_4|PF14392.2|1.5,zf-CCHC_4|PF14392.2|0.18,zf-CCHC_4|PF14392.2|4.8,zf-CCHC_4|PF14392.2|0.25,zf-CCHC_4|PF14392.2|21,zf-CCHC_4|PF14392.2|0.58,zf-CCHC_4|PF14392.2|0.084,zf-CCHC_4|PF14392.2|7.9e+03,zf-CCHC_4|PF14392.2|0.52,zf-CCHC_3|PF13917.2|0.049,zf-CCHC_3|PF13917.2|0.85,zf-CCHC_3|PF13917.2|74,zf-CCHC_3|PF13917.2|1.9,zf-CCHC_3|PF13917.2|0.69,zf-CCHC_3|PF13917.2|0.00074,zf-CCHC_2|PF13696.2|0.0026,zf-CCHC_2|PF13696.2|15,zf-CCHC_2|PF13696.2|6e+02,zf-CCHC_2|PF13696.2|20,zf-CCHC_2|PF13696.2|1.4,zf-CCHC_2|PF13696.2|2,zf-CCHC_2|PF13696.2|0.0027,zf-CCHC_2|PF13696.2|0.11 S_Transcript_38210:240-1019(+)
MSRDSMSRSGSTSRSRSRSQSPMNRKFRTERHSHRTAPYVREARQGVSQINLCKNCKRPGHFARECPNVGICHNCGLPGHIALECTTKSLCWNCREPGHTAGNCPNEGICHRCGLGGHQARDCSAPPPPPPDDARMCNNCYKQGHIAADCTNDKACNNCRRTGHLARDCKNEPVCNLCNVSGHVAKDCPKADVLAGRGGGIRGGPRGGFRDVVCRNYQQLGHMSRDCIAPVICHMCGGRGHLAFECPSGRYLDRYPRRF*

Click here to download the sequence:
Link to NCBI Protein BLAST