Transcript Information: S_Transcript_38232.p1


Annotated TAIR IDAT3G12130.1
Annotated Gene NameKH domain-containing protein / zinc finger (CCCH type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3864486-3866406 | Reverse length=248
E-Value4.2E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 159.261940894835
Replicate 249.205327913495
Replicate 346.265282958861
Condition 2: 8 Hour
Replicate 161.411261463084
Replicate 257.505645300741
Replicate 350.689232105316
Condition 3: 24 Hour
Replicate 140.611965527187
Replicate 242.212322592372
Replicate 337.443034993162


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38232.p1 GENE.S_Transcript_38232~~S_Transcript_38232.p1 ORF type:complete len:291 (+),score=56.87,zf-CCCH|PF00642.20|2e-05,zf-CCCH|PF00642.20|3.6e-05,zf-CCCH|PF00642.20|2.5e-09,KH_1|PF00013.25|1e-12,Torus|PF16131.1|0.0032,Torus|PF16131.1|82,Torus|PF16131.1|0.0012,KH_3|PF13014.2|1.5e-07,zf-CCCH_2|PF14608.2|1.7,zf-CCCH_2|PF14608.2|0.013,zf-CCCH_2|PF14608.2|0.0034 S_Transcript_38232:307-1179(+)
ATGGCGGACTTTAGAAAGAGAGGCAGGCACGATGGCCCTAACGCTAATGGCGGTGCTAAGAAGTTCAAGCAAGAAATGGAGTCAACTGGTATAGGAAGCAAATCAAAGCCTTGCACCAAGTTCTTCAGCACATCGGGATGTCCTTTTGGGGAGAGTTGTCACTTCCTGCACCATGTTCCGGGCGGATACAATGCTGTTGCTCATATGATGAACTTGCCTCCAGTATCAAGAGTTGCTCCACCCCCTCCAGCTGCACCAAATGGCTCTGCCGCCACAGCTAAGACCCGCATGTGCAAAAAATACAATACTGCTGAAGGGTGCAAATTCGGTGACAAATGCCATTTTGCCCATGGCGAGTGGGAACTCAACAAGCCTGTCGCTCCATCATTTGATGATCCTCGTGCGATGGGCCCACCGATGCAAGGACTTCATGGTGTGCGAAATGAGCCACCTGCTCCAGCCGGTCTTGCTCCCGGTTTTGGTGCCTCAGCAACTGCTAAGATCAGTGTAGACGCCTCTCTAGCAGGAGCCATCATCGGAAAAGGTGGTGTGAACTCGAAGCAAATTTGCCGACAGACTGGTGTGAAGCTTTCCATTCGGGAGCACGAGTCTGATTCAACCCTGAGAAACATTGAGCTCGAGGGGACATTTGATCAGATCAAGCTGGCAAGTGCTATGGTGAGGGATCTCGTAGCCAGTGTAAGTGCAGCTGCTCCTCAGAAAGCTCCCAGTGGAGGACCTGGAGGCCGTGCGCAACAATCAAGTAATTTCAAGACCAAGCTTTGTGAAAACTTTTCCAAGGGTTCGTGTACTTTCGGGGACCGGTGCCACTTTGCTCACGGGGCTGCCGAGCTAAGGAAATCTGCAGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38232.p1 GENE.S_Transcript_38232~~S_Transcript_38232.p1 ORF type:complete len:291 (+),score=56.87,zf-CCCH|PF00642.20|2e-05,zf-CCCH|PF00642.20|3.6e-05,zf-CCCH|PF00642.20|2.5e-09,KH_1|PF00013.25|1e-12,Torus|PF16131.1|0.0032,Torus|PF16131.1|82,Torus|PF16131.1|0.0012,KH_3|PF13014.2|1.5e-07,zf-CCCH_2|PF14608.2|1.7,zf-CCCH_2|PF14608.2|0.013,zf-CCCH_2|PF14608.2|0.0034 S_Transcript_38232:307-1179(+)
MADFRKRGRHDGPNANGGAKKFKQEMESTGIGSKSKPCTKFFSTSGCPFGESCHFLHHVPGGYNAVAHMMNLPPVSRVAPPPPAAPNGSAATAKTRMCKKYNTAEGCKFGDKCHFAHGEWELNKPVAPSFDDPRAMGPPMQGLHGVRNEPPAPAGLAPGFGASATAKISVDASLAGAIIGKGGVNSKQICRQTGVKLSIREHESDSTLRNIELEGTFDQIKLASAMVRDLVASVSAAAPQKAPSGGPGGRAQQSSNFKTKLCENFSKGSCTFGDRCHFAHGAAELRKSAV*

Click here to download the sequence:
Link to NCBI Protein BLAST