Transcript Information: S_Transcript_382401.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.15472675136733
Replicate 20.64136016155566
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.39529903912234
Replicate 30.146639793053


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_382401.p1 GENE.S_Transcript_382401~~S_Transcript_382401.p1 ORF type:internal len:172 (+),score=30.55,RVT_1|PF00078.23|1.1e-13 S_Transcript_382401:3-515(+)
TTATCTAATGCTGCTTTCTTTGTATTGGTGAATGGGGCCTTGAGGGAGTGGTTCTCCTCCTCCGGGGGGTTACGTCAAGGGGATCCTTTGTCCCCTTTTCTGTTTACTTTGGTGGTGGATGTGTTGAGTAGGCTGTTAGATAAAGCGGTGGACATAGGGGTGGGGGAGGGTTTTGTTATGGGCAAGGAGCGGCTGCAGGTCTCCCATTTAGCAAACAGTTTGCTGTTTGCTGATGATACTATCTTGTTTTTGTGGGCAGACCTTTTGAGGTTCAAGTATGTCCTTACGGTTCTGCAAGTGTTTGAGATTGTCTCTGGGATGCGGGTGAATCTTAGTAAGAGTAGTTTGGCTGGGGTGAATGTCAGTCCCGAGGTGTTGGGTTCTTTTGCCTCCTTGGCAGGTTGTCAGGTGCAGGGTTGGCCTTTGTTGTACCTGGGTGTTCCTCTTGTTGTAATCCACGGTCGGTTTCCTTCTGGGATATGGTGGTGGAACGGGTGGCGAGTCGGTTGGAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_382401.p1 GENE.S_Transcript_382401~~S_Transcript_382401.p1 ORF type:internal len:172 (+),score=30.55,RVT_1|PF00078.23|1.1e-13 S_Transcript_382401:3-515(+)
LSNAAFFVLVNGALREWFSSSGGLRQGDPLSPFLFTLVVDVLSRLLDKAVDIGVGEGFVMGKERLQVSHLANSLLFADDTILFLWADLLRFKYVLTVLQVFEIVSGMRVNLSKSSLAGVNVSPEVLGSFASLAGCQVQGWPLLYLGVPLVVIHGRFPSGIWWWNGWRVGWK

Click here to download the sequence:
Link to NCBI Protein BLAST