Transcript Information: S_Transcript_382405.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value5E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14308065180205
Replicate 20
Replicate 30.099154495073121
Condition 2: 8 Hour
Replicate 10.11465263611362
Replicate 20
Replicate 30.11460133120958
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.27120477854963


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_382405.p1 GENE.S_Transcript_382405~~S_Transcript_382405.p1 ORF type:internal len:186 (+),score=33.06,RVT_1|PF00078.23|1.4e-15 S_Transcript_382405:3-557(+)
TTATCTAATGCTGCTTTCTTTGTATTGGTGAATGGGGCCTTGAGGGAGTGGTTCTCCTCCTCCGGGGGGTTACGTCAAGGGGATCCTTTGTCCCCTTTTCTGTTTACTTTGGTGGTGGATGTGTTGAGTAGGCTGTTAGATAAAGCGGTGGACATAGGGGTGGGGGAGGGTTTTGTTATGGGCAAGGAGCGGCTGCAGGTCTCCCATTTGCAGTTTACTGATGATACTATCTTGTTTTTGGCGGCAGACCTACTGAGGTTCAAGTATGTCCTTACGGTTCTGCAAGTGTTTGAGATTGTCTCTGGGATGCGGGTGAATCTTAGTAAGAGTAGTTTGGCTGGGGTAATTGTCAGCTTGGAGGTGTTGGATTCTTTTGCTTCCTTGGCGGGTTGTCTGGTGCAAAGCTGGCCTTTGTTGTACCTGGGTGTTCCTCTTGGTGGTAATCCACGATCCATTTCTTTCTGCGATCCGGTGGTGGAACGGGTGACAAGTAGGTTGGAGGGATGGAAGGGTGCTTATTTCTCCTTCGGAGGCCGGGTCACTTTGCTGCAGTCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_382405.p1 GENE.S_Transcript_382405~~S_Transcript_382405.p1 ORF type:internal len:186 (+),score=33.06,RVT_1|PF00078.23|1.4e-15 S_Transcript_382405:3-557(+)
LSNAAFFVLVNGALREWFSSSGGLRQGDPLSPFLFTLVVDVLSRLLDKAVDIGVGEGFVMGKERLQVSHLQFTDDTILFLAADLLRFKYVLTVLQVFEIVSGMRVNLSKSSLAGVIVSLEVLDSFASLAGCLVQSWPLLYLGVPLGGNPRSISFCDPVVERVTSRLEGWKGAYFSFGGRVTLLQS

Click here to download the sequence:
Link to NCBI Protein BLAST