Transcript Information: S_Transcript_38290.p2


Annotated TAIR IDAT4G08150.1
Annotated Gene NameKNOTTED-like from Arabidopsis thaliana
Annotated Gene Symbol(s)KNAT1, BP, BP1
Annotation TypeOrtholog
Chromosome Positionchr4:5147969-5150610 | Reverse length=398
E-Value2.9E-155
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 147.903402223325
Replicate 220.648508175623
Replicate 34.3033050861735
Condition 2: 8 Hour
Replicate 111.318861014478
Replicate 21.4340928615209
Replicate 321.206535565981
Condition 3: 24 Hour
Replicate 10.11202504354151
Replicate 22.6731675192615
Replicate 38.9247234048872


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38290.p2 GENE.S_Transcript_38290~~S_Transcript_38290.p2 ORF type:complete len:390 (+),score=82.29,KNOX2|PF03791.9|7.3e-25,KNOX2|PF03791.9|3.4e+02,KNOX1|PF03790.9|4.6e-23,Homeobox_KN|PF05920.7|1.2e-16,ELK|PF03789.9|7.7e-10,Homeobox|PF00046.25|1.3e-06 S_Transcript_38290:4403-5572(+)
ATGGAGAATTACAGCCATGACATGAGCGAGAATAGTGGAGGTCATAATCCTCATCATAGGTCAAATTTCACCTATGTAACGTCGTCAATTCTTGCTCCAAATAACTCCTCTTCTAATTCTCCTCCCTCGTCGTCGTATGGCGGTGGTGGAAGGACTGCATTTCAGCCGTGCTTTCAGCCGCAAGATGGTGGTCACCCGGTGGTGAAAACCGAAGGTGGTGGTGGTGGTCAGTATTTTCCGAGATTTCACTACCCTTTGCTTACTAGTGTTGGTGCTCGAACTCAAGTTCCACCGAATCATCACCATCAAGAACAACAAGTTGTTGGTGGTGGCGGTAATGGTAATACTACTACTAGTAGTAGTAATGAGGTTGAAGCTATTAAAGCAAAGATTATGGCTCATCCTCAATACTCAAATCTCTTGGAAGCTTACCTTGATTGCCAAAAGGTAGGAGCGCCACCGGAAATAGCAGCGAGGCTGGCGGCAGCGCAGCAGGAATTCGAGGCGAGGCAACGGGCCTCATTTACAGCATGTATGGATGGCTCTAAGGACCCTGAACTCGATCAATTTATGGAGGCGTATTATGATATGCTGGTGAAGTATAGAGAGGAGCTAACAAGGCCTGTCCAAGAAGCAATGGAGTTCATGCGAAGAATTGAAGCTCAGCTTAACGTCCTTTGTAATGGCCGTGTCCGTGTCTTCTCTACTGATGAGAAATCGGAAGGAGTAGGATCATCAGAAGAGGAGCAAGAAAACAGCGGAGGAGAGACAGATGTAGCAGAGATAGACCCGCGAGCTGAAGACCGAGAACTGAAGAATCACCTCCTTAAGAAATACAGCGGCTACTTGAGTAGTCTCAAGCAGGAGCTCTCTAAGAAGAAGAAGAAAGGTAAGCTTCCCAAGGAGGCCCGCCAGAAGCTGCTTAGCTGGTGGGAGTTGCATTACAAGTGGCCTTATCCTTCGGAATCGGAGAAAGTGGCACTAGCAGAAGCAACGGGATTGGACCAAAAACAGATCAACAACTGGTTCATAAACCAGAGAAAACGCCATTGGAAGCCATCGGAAGACATGCAATTCATGGTGATGGATGGTATTCATCCTTCACAAAATGCCGCACTTTACATGGATGGACATTACATGGGAGACGGACCTTATCGATTTGGGACGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38290.p2 GENE.S_Transcript_38290~~S_Transcript_38290.p2 ORF type:complete len:390 (+),score=82.29,KNOX2|PF03791.9|7.3e-25,KNOX2|PF03791.9|3.4e+02,KNOX1|PF03790.9|4.6e-23,Homeobox_KN|PF05920.7|1.2e-16,ELK|PF03789.9|7.7e-10,Homeobox|PF00046.25|1.3e-06 S_Transcript_38290:4403-5572(+)
MENYSHDMSENSGGHNPHHRSNFTYVTSSILAPNNSSSNSPPSSSYGGGGRTAFQPCFQPQDGGHPVVKTEGGGGGQYFPRFHYPLLTSVGARTQVPPNHHHQEQQVVGGGGNGNTTTSSSNEVEAIKAKIMAHPQYSNLLEAYLDCQKVGAPPEIAARLAAAQQEFEARQRASFTACMDGSKDPELDQFMEAYYDMLVKYREELTRPVQEAMEFMRRIEAQLNVLCNGRVRVFSTDEKSEGVGSSEEEQENSGGETDVAEIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSESEKVALAEATGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGIHPSQNAALYMDGHYMGDGPYRFGT*

Click here to download the sequence:
Link to NCBI Protein BLAST