Transcript Information: S_Transcript_38304.p1


Annotated TAIR IDAT2G46340.1
Annotated Gene NameSPA (suppressor of phyA-105) protein family
Annotated Gene Symbol(s)SPA1
Annotation TypeHomolog
Chromosome Positionchr2:19022572-19026821 | Reverse length=1029
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.4594663192186
Replicate 29.6628830208749
Replicate 38.9726795832836
Condition 2: 8 Hour
Replicate 19.0178565310854
Replicate 28.3984933404799
Replicate 39.6346711396841
Condition 3: 24 Hour
Replicate 111.169875700692
Replicate 29.1926571226609
Replicate 39.4956779907071


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38304.p1 GENE.S_Transcript_38304~~S_Transcript_38304.p1 ORF type:complete len:927 (+),score=170.03,WD40|PF00400.28|1.9e+03,WD40|PF00400.28|4.3e+02,WD40|PF00400.28|22,WD40|PF00400.28|0.082,WD40|PF00400.28|1.4e+03,WD40|PF00400.28|0.081,Pkinase|PF00069.21|11,Pkinase|PF00069.21|6.5e-05 S_Transcript_38304:367-3147(+)
ATGACTGCTAACAATGTTGTAGAGATTGAGACGGATAATGTAGACTTGCCACTAAAGCAGGAGGAATGCTCACAACATACAAATGATCATTTGGGAGGTCACGGGTCTTCGATCCATAATTGTGCAAATTCATCTGAGAGCAATGGCTTGGACCAACGTGGGACGTCATTCTTAGGGTTGGAGTCGCCTGGTAATATTGCCCAATCGATTGATCCCATAGGGAATGGGTTCAAAGAGTTGAAAGTTGAAAATTGCAAGAACACAGTCTCAGGCGTTGTTGATTTACCTAGTAGCACAACTAACTTGCTTGTGAAGCAGGGACAGTGGTCACATTTGTATAAGTTGGTAGATCGGTCCAAGAATAAGGGTGGTCTTGAAGATCCATTCTCAAGAGCCAAGGATAAGCTTAAGGCTAGCATCCAAGAGAGAAGAGGTGATCCTAATTCATGGCACCTAAGGCATCTGAAGACCAGGCATGTTGATGAAACTGGAGTGTGTGTTGATTTGAAAAAGGGCGAGAATCCCAATTCTGAAAGTCAATTCCTTCCTCAGGATGCAAGATTGAAGATTTTGTCCACATCGAGTTTCTCTCAATTTTTTGGAAGTAAAACCCTGAAGGGTAAGGGGGTCATCCATGCACATCCAGGGGACAAAAATGAAATCGCCAGTGGTGCCACTTTCCAGACTACTGAAAGGCTGTTTTCTACAGTAGGCACAGATATTGGTGCCCGAATGCAACTTTTGCAATATCACAATGGTGGGATACAATTGGACTCAAACCATGATGGAATTAGCTTAAGAGATTGGCTTATACGTCGGCATCATGGAAAGAGCAAAGCTGAAAGACTTTTTTATTTCAGGGAAATTGTAGAGCTAGTAAATTTGGCTCACTCTCAAGGATTTGTCCTTCAACACTTGCGGCCATCATACTTCACTTTAATGACCTCAAAGAAGTTGAAGTATATTGGCTTATCAACCCAGGTGGACTCAGATGTCTCTACATCCCAAGTCAGATGCAAAAAAAGGCCACCTGATGATGATATCCATGTTTTTTGTACGCCTGACAAGAAGCAACAAAAACTCATCTCAGACTTGAAGTTTCAAAACCATGTACCTCTAGACATCTCCAAAAGTGATTCAAGCATTGCTACACATCAGGAAGCAAATTATGGTATAGATTGTCCATCTGGTTCTGACTCTGGGCCCAAAGTTCTGCGTAGCACCTGCCATCAAGCTACTGAAGTGGAGAAGTCTCTTTTAGCAGACCTGCTGTTGGAAGAAAAGTGGTATGCTTGTCCAGAGGAGCTCGGTGGGAGGGGTTGCAAGTTTTCATCTAATATCTATAGTCTTGGAGTGCTACTTTTTGAGTTGCTTTGCCCTTTTGATTCAATGGAGGCTCGTTCTAATGCATTGTTGGACATGCACCATAGGATTCTGCCACCATTCTTTTTGTCTGAAAGTCCAAAGGAAGCTGGGTTCTGTCTGTGGCTAATCCACCCCGAACCACTCTCACGCCCAACAATAAGAGAAATTCTACTCTCAGACTTGTTCAGCAGAGCCCAAGACCGGCATTCAAGTGATGAGATAGCTATATTTGCCAACAATGATGATATGGCTGAGTCAGAACTACTGCTAGATTTTCTAGTTTCTTTGAAAGATCAGAAGCAGGACCATGCAGTGGGTTTAATTGAGGATATTAGATGTATAGAAGCTGACTTAAAAGGACTCAAATCGTTGCCTACATCAAATTCAGGTCTTGTTGAAAAGGATTACAGTCTACAAGACTTCATGAAATTAGTTGCTAGATCTGGTGGGAATGAGGTTAGATTGTTAAACAATATGTCTCAGCTTGAAAAGGCTTACTTTTCAGAACGATCCTCAACTACTGTCACAAGTGGTCCTGATCGTGCTGATAGAGACTTGCTGAAGAACAGAGAAGCTTGGTTCCAGCTACACAAACAGAACGAGGCAGTAAGCAAGAACCAGAAGTCTATTGACGGGCTTGACATTTTCTTTGAAGGACTATGTAAATTTACTTGCTACAGTAAATTTGAGTTGCGTGGAACTTTGAGAAACAATGACCTCCTTAACTCTGCAAATGTGATATGCTCCCTAAGCTTTGATCGTGATGAAGAGTACATTGCTATTGCTGGAGTATCGAAGAAAATAAAGATATTTGAGTATTCTGCTCTTGCAAATGACACTATTGATATCCACTATCCTGTGATTGAGATGGGAAATAAATCCAAGCTTAGCTGCATTTCCTGGAACACCTACATCAGGAACCATTTGGCTTCAACTGATTATGATGGTATTGTTCAGGTTTGGGATGCAAGCACCGGTTTGGGATTTTCTCAGCACATTGAACACCAGAAAAGGGCTTGGTCAGTTGACTTCTCTCAAGTCGACCCAACAAAATTTGCCAGTGGAAGTGATGATTGTTCTGTGAAGCTATGGTGCACTAATGAAAAAAGGTCAACCTCTACTATCTGGAGTCCTGCCAATGTCTGCTGCGTACAGTTTTCTCCGTACTCTTCTCACCTTTTGGCATTTGGGCCTGCTGATTACAAAATCTATTGTTATGATCTTCGGCACACGAGAATTCCCTGGTGTACGTTAGCTGGTCATGAGAAGGCTGTTAGCTATGTCAAATTTCTAGATGCTGAAATGCTTGTTTCTGCTTCTACTGACAATACTTTAAAGCTTTGGAATCTCAACAAAACAAGCCTATCTGGGGCTGTCCTCACAGGCTTGTCATTTAACCTATTGTGGTCACGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38304.p1 GENE.S_Transcript_38304~~S_Transcript_38304.p1 ORF type:complete len:927 (+),score=170.03,WD40|PF00400.28|1.9e+03,WD40|PF00400.28|4.3e+02,WD40|PF00400.28|22,WD40|PF00400.28|0.082,WD40|PF00400.28|1.4e+03,WD40|PF00400.28|0.081,Pkinase|PF00069.21|11,Pkinase|PF00069.21|6.5e-05 S_Transcript_38304:367-3147(+)
MTANNVVEIETDNVDLPLKQEECSQHTNDHLGGHGSSIHNCANSSESNGLDQRGTSFLGLESPGNIAQSIDPIGNGFKELKVENCKNTVSGVVDLPSSTTNLLVKQGQWSHLYKLVDRSKNKGGLEDPFSRAKDKLKASIQERRGDPNSWHLRHLKTRHVDETGVCVDLKKGENPNSESQFLPQDARLKILSTSSFSQFFGSKTLKGKGVIHAHPGDKNEIASGATFQTTERLFSTVGTDIGARMQLLQYHNGGIQLDSNHDGISLRDWLIRRHHGKSKAERLFYFREIVELVNLAHSQGFVLQHLRPSYFTLMTSKKLKYIGLSTQVDSDVSTSQVRCKKRPPDDDIHVFCTPDKKQQKLISDLKFQNHVPLDISKSDSSIATHQEANYGIDCPSGSDSGPKVLRSTCHQATEVEKSLLADLLLEEKWYACPEELGGRGCKFSSNIYSLGVLLFELLCPFDSMEARSNALLDMHHRILPPFFLSESPKEAGFCLWLIHPEPLSRPTIREILLSDLFSRAQDRHSSDEIAIFANNDDMAESELLLDFLVSLKDQKQDHAVGLIEDIRCIEADLKGLKSLPTSNSGLVEKDYSLQDFMKLVARSGGNEVRLLNNMSQLEKAYFSERSSTTVTSGPDRADRDLLKNREAWFQLHKQNEAVSKNQKSIDGLDIFFEGLCKFTCYSKFELRGTLRNNDLLNSANVICSLSFDRDEEYIAIAGVSKKIKIFEYSALANDTIDIHYPVIEMGNKSKLSCISWNTYIRNHLASTDYDGIVQVWDASTGLGFSQHIEHQKRAWSVDFSQVDPTKFASGSDDCSVKLWCTNEKRSTSTIWSPANVCCVQFSPYSSHLLAFGPADYKIYCYDLRHTRIPWCTLAGHEKAVSYVKFLDAEMLVSASTDNTLKLWNLNKTSLSGAVLTGLSFNLLWSR*

Click here to download the sequence:
Link to NCBI Protein BLAST