Transcript Information: S_Transcript_38313.p1


Annotated TAIR IDAT1G19140.2
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquinone biosynthetic process; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: COQ9 (InterPro:IPR013718), Ubiquinone biosynthesis protein COQ9 (InterPro:IPR012762); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6611026-6612414 | Reverse length=312
E-Value6E-116
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.263260484278
Replicate 240.05148445242
Replicate 334.842100839757
Condition 2: 8 Hour
Replicate 120.537804879284
Replicate 219.51181117158
Replicate 320.649727367326
Condition 3: 24 Hour
Replicate 153.991615445503
Replicate 256.144442314133
Replicate 356.033064559093


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38313.p1 GENE.S_Transcript_38313~~S_Transcript_38313.p1 ORF type:5prime_partial len:352 (+),score=41.93,COQ9|PF08511.7|3e-28 S_Transcript_38313:1-1056(+)
CCTTACACCGTCTTTCTAACCCCCCCCCCCCCCCCCCCAACCCCAACCTCGTCATCGACACTCTCACTCACCCACCGGCGATCGAAAAACTCAAAAAAAAAAAAAATCACAAAAGAGATAAAAAAAATGTATCGAACGGCGGTGAAGCGGTTTTTCCACGATTCCTTAACCAGAGGCACCGGTCTTCGGACCTTAACCCGACCCATAATCATAAACCCGGCCCGGTTCTGCACTTCGTCCGGCACTACCCAACCATTTTCCGGTCAAAATCCAAACCCTAACCCTAACCTGAACTTCGATCAGTTCAAATGCAATCCTTCCGATACACCTCCCCAAACGACGTCGTCTTCGTCTTCAGATGAGGAAGAGTCTCATCGCCGGAGCTCCGTCAATAGGCGCCCGATTTCTGAGTATAAGGAGGAGCAAGCTCGGGTTCTTCAGGCCTCTCTTCGTCACGTGAGTAGATTGGGTTGGACTGAGGCAGCAAGGATGGCGGGTGCGAGGGAAGTTGGTGTGTCGCCGTCTATCGTTGGATCTTTCTCTAGGAAAGAAGCTGCCCTTGTTGAGTATTTCATGGACGACTGTTTGGAAAAACTCATTGACATAGTTGAGGAAGATATGGAGCTGAAAAACCTTATTCCTAGTGATCGCATTTCAAAACTTGTAAGGCATCGACTAGAAATGCAGGCTCCTTATATATCAAAGTGGGCCCAAGCCCTTAGCATCCAGGCAATGCCAACAAATATTCCAACAAGTTTTAAGCAGCGTGCTGCGCTTGTTGATGAGATTTGGCTTGCTGCTGGTGATGGTACCTCTGATCTTGACTGGTATGTAAGACGTACTGTGCTTGGAGGAATATATTCCACAACAGAGGTTTATATGCTGACAGACAATTCTCCAGACTTCCGGGACACATGGGCATTCTTAAATGCTCGGGTTAGAGATGCATTTGATCTAAAGAAGTCTTTACAAGAGGTGCAGTATTTGGCAGAAACTGTCAGTGCAGGCCTGGGTGGTTCATTGCAGGGTCTGGCGAAAGGCGTCTTCAAAGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38313.p1 GENE.S_Transcript_38313~~S_Transcript_38313.p1 ORF type:5prime_partial len:352 (+),score=41.93,COQ9|PF08511.7|3e-28 S_Transcript_38313:1-1056(+)
PYTVFLTPPPPPPTPTSSSTLSLTHRRSKNSKKKKITKEIKKMYRTAVKRFFHDSLTRGTGLRTLTRPIIINPARFCTSSGTTQPFSGQNPNPNPNLNFDQFKCNPSDTPPQTTSSSSSDEEESHRRSSVNRRPISEYKEEQARVLQASLRHVSRLGWTEAARMAGAREVGVSPSIVGSFSRKEAALVEYFMDDCLEKLIDIVEEDMELKNLIPSDRISKLVRHRLEMQAPYISKWAQALSIQAMPTNIPTSFKQRAALVDEIWLAAGDGTSDLDWYVRRTVLGGIYSTTEVYMLTDNSPDFRDTWAFLNARVRDAFDLKKSLQEVQYLAETVSAGLGGSLQGLAKGVFKG*

Click here to download the sequence:
Link to NCBI Protein BLAST