Transcript Information: S_Transcript_383552.p1


Annotated TAIR IDAT1G09910.1
Annotated Gene NameRhamnogalacturonate lyase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3220151-3224451 | Reverse length=675
E-Value1.2E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.28433853756177
Replicate 20
Replicate 30.85263390419925
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.16814696270077


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_383552.p1 GENE.S_Transcript_383552~~S_Transcript_383552.p1 ORF type:5prime_partial len:150 (+),score=30.38 S_Transcript_383552:3-452(+)
TGGATTTCCCTTGATCCTGCTATTGGAATTTGGCTTATAACACCGACTGATGAATTCCGTATGGGTGGTCCTTTTAAGCAAGACCTTACTTCTCATGCCGGCCCTACACTTCTTTCTATGTTTCATAGCACTCATTATGCTGGTAAAGACTTGACAATGAGGTTCCAAGATGGAGAGCCATGGAAAAAGGTCTTTGGACCGTTCTTTGTCCATTTGAATTCGCTTCCTGGTAAAGGAGATCCTAAAGTTCTATGGCAAAAGGCTAAGGAACAGTTGAAGGAGGAAATGAAAACCTGGCCTTATGAATTCGCGTTGTCAAATGATTTTCCCAAGGCTAAACAACGGGGATCAGTTGCAGGCAGATTATTAGTCAATGATAGATTTAAAGAACTGAAGCCTGCTGCTTCTGCGTGGGTTGGTCTAGCTGCACCAGGTGATGCAGGCTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_383552.p1 GENE.S_Transcript_383552~~S_Transcript_383552.p1 ORF type:5prime_partial len:150 (+),score=30.38 S_Transcript_383552:3-452(+)
WISLDPAIGIWLITPTDEFRMGGPFKQDLTSHAGPTLLSMFHSTHYAGKDLTMRFQDGEPWKKVFGPFFVHLNSLPGKGDPKVLWQKAKEQLKEEMKTWPYEFALSNDFPKAKQRGSVAGRLLVNDRFKELKPAASAWVGLAAPGDAGS*

Click here to download the sequence:
Link to NCBI Protein BLAST