Transcript Information: S_Transcript_383868.p1


Annotated TAIR IDAT3G44330.1
Annotated Gene NameINVOLVED IN: protein processing; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicalin (InterPro:IPR016574), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has 245 Blast hits to 243 proteins in 99 species: Archae - 6; Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:16006754-16010671 | Forward length=565
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.26905840923799
Replicate 30.22491141565366
Condition 2: 8 Hour
Replicate 10.26006573557479
Replicate 21.0913096897428
Replicate 31.0397974441454
Condition 3: 24 Hour
Replicate 10.26640101817798
Replicate 20.27638794605302
Replicate 30.92275772213839


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_383868.p1 GENE.S_Transcript_383868~~S_Transcript_383868.p1 ORF type:5prime_partial len:82 (+),score=21.41 S_Transcript_383868:2-247(+)
GTTCGTGACCTAGATGTCTCCTCCATTCAAGATTACATTGATCGAAAGCAGACACTTGGAGGTCTGTTGTTCTTGCTGCCTCGGGCTTTGAATTCTGAAAATGGGGAGGGCAAAGACGATGATCCTGAAAAAGAAGCAATGAGAAACAAACTGGTGCAGCTGGAAAGGCTTCTAGTACATGCAAATTTACCTGTGAGTGGGATGATGACGATGTTTGTTGCTTTCATTCATATTTTATTTTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_383868.p1 GENE.S_Transcript_383868~~S_Transcript_383868.p1 ORF type:5prime_partial len:82 (+),score=21.41 S_Transcript_383868:2-247(+)
VRDLDVSSIQDYIDRKQTLGGLLFLLPRALNSENGEGKDDDPEKEAMRNKLVQLERLLVHANLPVSGMMTMFVAFIHILFS*

Click here to download the sequence:
Link to NCBI Protein BLAST