Transcript Information: S_Transcript_384312.p2


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16529814431789
Replicate 20.13703595998456
Replicate 30.68730693479257
Condition 2: 8 Hour
Replicate 10.26491168095817
Replicate 20.13895558161321
Replicate 30.13239656897504
Condition 3: 24 Hour
Replicate 10.54273002461104
Replicate 20.84461409601295
Replicate 30.46997598270403


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_384312.p2 GENE.S_Transcript_384312~~S_Transcript_384312.p2 ORF type:3prime_partial len:161 (+),score=11.84,RVT_1|PF00078.23|3e-24 S_Transcript_384312:1358-1837(+)
ATGAGTAGGACTAGACCCTTACTTAGGAATATCATCTCCCCCAACCAGAATAGCTTTATCCCCGGAAGAGGTCTGGATGTGAATTATATTGTTGACTCTCAGATCATGCATTCCATTGGTAAGAAAAAAGGTAAGAAGGGTTGGTTTGTGCTAAAAATTGACCTTGAGAAAGCTTATGATAGGATGGAGTGGGATTTCATTAGAAACATGTTGTTTTCCTTTAATTTTGACCCTGCTTCCATTAGAATCATCATGGAGTGCATTTCCACTGTTTTTACCTCTGTCCTAGTCAACGGAGGCATTACGGAGGAGTTTCAACCTTCTAGAGGTTTAAGACAAGGGGACCCTCTCTCACCCCTTATCTTCATCCTGTATATGGAATTTTTGTGTAAGCTTATCCACAATGCTTGTGAGGACAAATCCTGGACCCCTTTTTCATTCTCTAAATCTGGTCTTGTGATCTCCCACCTCATGTTTGCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_384312.p2 GENE.S_Transcript_384312~~S_Transcript_384312.p2 ORF type:3prime_partial len:161 (+),score=11.84,RVT_1|PF00078.23|3e-24 S_Transcript_384312:1358-1837(+)
MSRTRPLLRNIISPNQNSFIPGRGLDVNYIVDSQIMHSIGKKKGKKGWFVLKIDLEKAYDRMEWDFIRNMLFSFNFDPASIRIIMECISTVFTSVLVNGGITEEFQPSRGLRQGDPLSPLIFILYMEFLCKLIHNACEDKSWTPFSFSKSGLVISHLMFA

Click here to download the sequence:
Link to NCBI Protein BLAST