Transcript Information: S_Transcript_384328.p1


Annotated TAIR IDAT5G47660.1
Annotated Gene NameHomeodomain-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19313008-19314636 | Forward length=398
E-Value2E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.456030462715
Replicate 22.2129849708146
Replicate 31.6256515088888
Condition 2: 8 Hour
Replicate 11.7501080199471
Replicate 22.1079857380897
Replicate 31.5549554483877
Condition 3: 24 Hour
Replicate 11.1951607988775
Replicate 20.41332179166591
Replicate 31.5332549790344


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_384328.p1 GENE.S_Transcript_384328~~S_Transcript_384328.p1 ORF type:complete len:329 (+),score=90.06 S_Transcript_384328:197-1183(+)
ATGGAAGACGTGTTGTCTTGTGTTGAGCTGGAGGAGGAGCTTAGTCCTTTCCCTGAGCCTGAGGCTGAGGCCTCTGCTGGTAGTGGTGATGGTGGTGGTTGTGGCGGAGTATTATCGTACCCTCACCCTGAATCAGCTGGTCTGAGTTGTTCCATTCCAGCACAGAAGCTCCGTCCCATCCGGTCCAGTGCTAATACATCCAACCCAAACCCAAAGGCAAAGGCGGAGGAGTTTAATAATGAGGATGAAGATGAGCTATCGGCGATGCAGCTTGTGAAGATCAAGTCAGAAATGGATGCCCACTTCATTTCTACTCTCAAGTCTCAATTTTCTCATCTCCTTGATTTGCCCTTCTCCTCCTCTTTTAGTTACTCATCAGATGGCAGTGGTGAATCAGCTGCTGCACCAAACCAATCAGAGTATAGGAAGCGTGTCAAAAGAAACAAGAGGAAGAAGGTGGAGTTGTTTCTTGAGAGTTTAATGGCTCAGGTTATTCACAAGCAGGAGCAGATGCATCAGCAATTCATGGACATGATTGAGCGCAAAGAAAGGGAACGCATCTCTAGAGAAATAGCTTGGAGGCAACAGGAGTTGGACCGAGCCAACAAGGAGGAGCAGCTTCGATCCCAAGAGGCTGCTCGTAGCCTTGCCCTTATTTCCCTCATCCACAAGACTCTTAACCATCCCCTGCCCCAGCATCAGCAGGAGCTGGATCCCAAGTTTCCTTCTCTAGGCTCAATAACCCCCATGTGGCAACAAGTCTCGGCTTCAACTGCTAACATGGGATACGTTAACGATGCTAACATCTGTACAGATAAGTGTGACAATATCAACAATAAGGCATCTGAGGGTGGGAATAAGCCTTCTGATACTGCCAATTCATTTCATGAGCTTCAAACCCTCTTCGGAAATCAACTCTTTCCCGCCACTAATGCTAAATCTCCCACTCATGAACATGCATTCTCCTATGGAAAGGAGATCCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_384328.p1 GENE.S_Transcript_384328~~S_Transcript_384328.p1 ORF type:complete len:329 (+),score=90.06 S_Transcript_384328:197-1183(+)
MEDVLSCVELEEELSPFPEPEAEASAGSGDGGGCGGVLSYPHPESAGLSCSIPAQKLRPIRSSANTSNPNPKAKAEEFNNEDEDELSAMQLVKIKSEMDAHFISTLKSQFSHLLDLPFSSSFSYSSDGSGESAAAPNQSEYRKRVKRNKRKKVELFLESLMAQVIHKQEQMHQQFMDMIERKERERISREIAWRQQELDRANKEEQLRSQEAARSLALISLIHKTLNHPLPQHQQELDPKFPSLGSITPMWQQVSASTANMGYVNDANICTDKCDNINNKASEGGNKPSDTANSFHELQTLFGNQLFPATNAKSPTHEHAFSYGKEIQ*

Click here to download the sequence:
Link to NCBI Protein BLAST