Transcript Information: S_Transcript_38442.p1


Annotated TAIR IDAT5G65380.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26123241-26126352 | Reverse length=486
E-Value1.4E-233
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.744334672536
Replicate 215.127531543365
Replicate 311.377247800099
Condition 2: 8 Hour
Replicate 16.7453592162248
Replicate 25.7577842275131
Replicate 37.9986775885097
Condition 3: 24 Hour
Replicate 113.390183986376
Replicate 215.762257952902
Replicate 315.955792334867


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38442.p1 GENE.S_Transcript_38442~~S_Transcript_38442.p1 ORF type:complete len:509 (+),score=44.11,MatE|PF01554.14|2e-29,MatE|PF01554.14|6.6e-27 S_Transcript_38442:207-1733(+)
ATGGCAGGTGATCATCAGAACAATGGAGTTAACAAGGAGGAAGAGCTACACGAGCCGCTGCTACCGCCGTCGTTACCAGCCAAGGAGGATAGCGAAGGAGGTGATATAATAGTAGGGGAGGAATTTAAGAATGAGAGAAGTTTAGGATTGGAAATATGGGAGGAATCAAAGAAGCTATGGCACGTGGCAGGGCCGTCAATATTCAGCAGAATAGCTTCCTTCACCATGAACGTTGTCACCACCGCCTTCGCCGGCCACCTCGGCGACATCGAACTCGCTTCTCTCTCCATAGCCAACACCGTTATTGTCGGCTTTAATTTCGGCCTCCTGTTGGGAATGGCGAGTGCACTAGAGACACTATGTGGACAAGCATTCGGAGCAAGGAAATATGGAATGTTAGGGATATACATGCAAAGGTCATGGATAGTATTGTTCCTATGTTGCTTCCTTCTTCTTCCCGTGTATATATTCACGACGCCCATGCTGAAGCTAGTGGGAGAGCCGGACGACGTAGCGGAGGAATCAGGGAAGGTGGCTATATGGCTGATTCCACTCCACTTTAGCTTCGCTTTTGTGTTTCCGGTGCAACGATTCTTGCAAAGCCAGCTTAAGACAGGCATCATTGCCTGGATTTCGCTAATGGCGTTCATTATACATCTGGTGTTAAGTTGGGTGTTGGTGTATGTGATCCCAATGGGAGTGTTGGGACTTTGCATTGCTCTTAATTTGTCGTGGTGGATACTGTTCGCTGGCCAAATGGGGTATGTTCTTTGGGGTGGATGTCCTCTCACTTGGACTGGTTTCTCTTGCCAAGCGTTTTCGGGTCTTTGGGATTTTGTTAAGCTCTCTGCCGCTTCCGGTGTTATGCTCTGCCTGGAGAACTGGTATTATCGAATACTGGTTTTGATGGTGGGAGGCTTACCGAATGCTGCAATTGCCGTTGATGCATTATCTGTCTGCATGACAATAAACGGCTGGGAGATGATGATTCCTCTAGCCTTTTTCGCTGCAACTGGAGTGCGAGTGGCTAATGAGCTGGGAGCGGGCAATGGAAAAGCAGCAAAGTTTGCAACCGCAGTTTCTGTAACAACATCCACAGTCATCGGACTCTTCTTTTGTGTGGTTATTATGATATTTCATGATAAGTTTGCATTCTTGTTCACATCGAGCATACCTGTTCTGCAAGAGGTCGATAAGCTTGCGTGGCTCTTAGCTGTGACAATTCTTCTCAACAGTGTTCAGCCTGTTCTTTCAGGGGTGGCAGTTGGATCAGGGTGGCAATCATGGGTAGCATACATAAACATTGCCTGCTACTACATTGTTGGGCTTCCCCTCGGCGCTGTCATGGGATGGGTTTTGAATACTGGTGTTGTGGGAATTTGGGCTGGGATGATTTTTGGTGGCACAGCTCTTCAGACACTGGTATTAGGTATCATAACACTACGATGTGACTGGGAAAAGGAGGCACAAAAAGCGGTTCTTGATGTACAGAGATGGTCCTCTACTGGGAAGAATGACCTAAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38442.p1 GENE.S_Transcript_38442~~S_Transcript_38442.p1 ORF type:complete len:509 (+),score=44.11,MatE|PF01554.14|2e-29,MatE|PF01554.14|6.6e-27 S_Transcript_38442:207-1733(+)
MAGDHQNNGVNKEEELHEPLLPPSLPAKEDSEGGDIIVGEEFKNERSLGLEIWEESKKLWHVAGPSIFSRIASFTMNVVTTAFAGHLGDIELASLSIANTVIVGFNFGLLLGMASALETLCGQAFGARKYGMLGIYMQRSWIVLFLCCFLLLPVYIFTTPMLKLVGEPDDVAEESGKVAIWLIPLHFSFAFVFPVQRFLQSQLKTGIIAWISLMAFIIHLVLSWVLVYVIPMGVLGLCIALNLSWWILFAGQMGYVLWGGCPLTWTGFSCQAFSGLWDFVKLSAASGVMLCLENWYYRILVLMVGGLPNAAIAVDALSVCMTINGWEMMIPLAFFAATGVRVANELGAGNGKAAKFATAVSVTTSTVIGLFFCVVIMIFHDKFAFLFTSSIPVLQEVDKLAWLLAVTILLNSVQPVLSGVAVGSGWQSWVAYINIACYYIVGLPLGAVMGWVLNTGVVGIWAGMIFGGTALQTLVLGIITLRCDWEKEAQKAVLDVQRWSSTGKNDLS*

Click here to download the sequence:
Link to NCBI Protein BLAST