Transcript Information: S_Transcript_38447.p1


Annotated TAIR IDAT5G65380.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26123241-26126352 | Reverse length=486
E-Value6.4E-84
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52699012346892
Replicate 21.2014390353102
Replicate 30.54780404208715
Condition 2: 8 Hour
Replicate 10.73899867435609
Replicate 20.44300690375696
Replicate 30.52761999022231
Condition 3: 24 Hour
Replicate 11.4058588385036
Replicate 20.78537960908134
Replicate 30.62430802982961


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38447.p1 GENE.S_Transcript_38447~~S_Transcript_38447.p1 ORF type:internal len:202 (+),score=1.71,MatE|PF01554.14|9.5e-21,MatE|PF01554.14|3.9e+03 S_Transcript_38447:1-603(+)
TTGGGAATGGCGAGTGCACTAGAGACACTATGTGGACAAGCATTCGGAGCAAGGAAATATGGAATGTTAGGGATATACATGCAAAGGTCATGGATAGTATTGTTCCTATGTTGCTTCCTTCTTCTTCCCGTGTATATATTCACGACGCCCATGCTGAAGCTAGTGGGAGAGCCGGACGACGTAGCGGAGGAATCAGGGAAGGTGGCTATATGGCTGATTCCACTCCACTTTAGCTTCGCTTTTGTGTTTCCGGTGCAACGATTCTTGCAAAGCCAGCTTAAGACAGGCATCATTGCCTGGATTTCGCTAATGGCGTTCATTATACATCTGGTGTTAAGTTGGGTGTTGGTGTATGTGATCCCAATGGGAGTGTTGGGACTTTGCATTGCTCTTAATTTGTCGTGGTGGATACTGTTCGCTGGCCAAATGGGGTATGTTCTTTGGGGTGGATGTCCTCTCACTTGGACTGGTTTCTCTTGCCAAGCGTTTTCGGGTCTTTGGGATTTTGTTAAGCTCTCTGCCGCTTCCGGTGTTATGCTCTGGTATATACTATTACACTCCCATCCTTTCTTCTTATACACAAACTTGCGTGTTACCCGGACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38447.p1 GENE.S_Transcript_38447~~S_Transcript_38447.p1 ORF type:internal len:202 (+),score=1.71,MatE|PF01554.14|9.5e-21,MatE|PF01554.14|3.9e+03 S_Transcript_38447:1-603(+)
LGMASALETLCGQAFGARKYGMLGIYMQRSWIVLFLCCFLLLPVYIFTTPMLKLVGEPDDVAEESGKVAIWLIPLHFSFAFVFPVQRFLQSQLKTGIIAWISLMAFIIHLVLSWVLVYVIPMGVLGLCIALNLSWWILFAGQMGYVLWGGCPLTWTGFSCQAFSGLWDFVKLSAASGVMLWYILLHSHPFFLYTNLRVTRT

Click here to download the sequence:
Link to NCBI Protein BLAST