Transcript Information: S_Transcript_38449.p1


Annotated TAIR IDAT5G04240.1
Annotated Gene NameZinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein
Annotated Gene Symbol(s)ELF6
Annotation TypeOrtholog
Chromosome Positionchr5:1169544-1174638 | Forward length=1340
E-Value2E-296
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4159971734709
Replicate 23.8692205567283
Replicate 34.2115501802849
Condition 2: 8 Hour
Replicate 14.5992819415309
Replicate 24.0235936732643
Replicate 34.9630928751897
Condition 3: 24 Hour
Replicate 14.7602283427265
Replicate 23.7885774575387
Replicate 33.5950824487889


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38449.p1 GENE.S_Transcript_38449~~S_Transcript_38449.p1 ORF type:complete len:1340 (+),score=269.73,JmjC|PF02373.18|8.9e-37,JmjN|PF02375.13|1.1e-15,zf-H2C2_2|PF13465.2|2.1e+03,zf-H2C2_2|PF13465.2|3.4e+03,zf-H2C2_2|PF13465.2|0.045,zf-H2C2_2|PF13465.2|7.1e-05 S_Transcript_38449:381-4400(+)
ATGGACAATGTTGAAATACCCAATTGGCTGAAGGAGTTGCCCTTAGCACCAGTGTTTCGACCAACCGACACAGAGTTCGCCGACCCAATTGCTTATATTTCAAAGATTGAGAAAGAAGCTAGTGCTTTTGGAATATGTAAGGTGATTCCTCCATTACCCAAACCATCAAAAAGATATGTGTTCAACAATTTAAACAATTCCCTCTCTAAATCTTTTCAACAGTGTTCGGATTTGAATTTTGTTGATGCTTCTTCTAGTAATTCCTTAAAGAGGGTTTCTGGGGACAAGGTAAAGGTAAATGTAAATGATACCGAGGCTAAAGCTGTATTTACAACTAGGCAACAAGAATTGGGTCAAGCTTCAAAGAGAAGCAGGGTTTCCGTTAATAATGCCCAACAACCAGCTGCTCAGAAGCAAGTTTGGCAAAGTGGGGAGGTATATACATTGGAGCAGTTTGAATCAAAGTCGAAAGCTTTTAGTAAGAGCGTATTAGGTAAAATTAAGGAAGTTACTCCTCAGGTTATAGAGGCATTGTTCTGGAAGGCTGCTTCAGAGAAGCCTATATATGTAGAATATGCTAATGATGTTCCAGGTTCTGGATTTGGTGAGCCAGAGGGCTTATTGTGTTATTTCCAAGCACAAAAGAGACGAACTAGGAGACTGTTTGGACAAAGGCATCAAGGGAAATCCTATTCTATGCAACAGGATGTGAAAACAGTGAATAATACCTCCAGTGGGGAAGTAATGCGCCAGAGCTTATGTCCAGTTCTAGAGCCACCTAAGGAATGTGCTAATGGACCACCTTCCTTGTTGAGTGCTGCAACTGAACAACCTACTCAGCTGGGGCCTAAATGTTCTAGTGGTGAAGTTGAAGGTACTGCTGGATGGAAGCTCTCGAACAGTCCTTGGAACCTACAAGTAATTGCTCGTTCTGCTGGCTCTCTTACTCGTTTTATGATGGAAGATATTCCTGGTGTTACATCCCCAATGGTTTACATTGGTATGTTGTTCAGTTGGTTTGCCTGGCATGTTGAAGATCATGAGCTTCATAGCTTGAATTTTCTTCACATGGGCGCACCAAAGACATGGTATGCCGTACCTGGAGGTCATGCATTTGCTTTAGAGGAAGTTATACGAAGACAGGCTTACGGAGGAGATATCGACCACTTAGCTGCACTAAAACTTCTTGGTGAGAAGACCACTCTTCTTTCACCCGAGTTATTAATTGCATCTGGCATTCCATGTTGCAGGTTGGTACAGAACCCTGGTGAATTTGTGGTGACATTTCCAAGGGCTTATCATGTAGGATTCAGTCATGGTTTCAACTGTGGAGAAGCTGCTAATTTTGGAACTCCTCAGTGGCTTACTATAGCAAAGGATGCTGCAGTGCGCAGGGCTGCTATGGACCATCTTCCCATGCTTTCCCATCAGCAGCTGCTATACTTATTGACCATGTCTTTTATTTCAAGGATCCCAAAATCTTTGCTTACTGGAGTACGTAGTTCTCGTTTGAGAGATCATCTGAAGAAAGAAAGAGAGCTCTTGGTTAAGAAGGCCTTTATTGATGATGTGCTGAAGGAAAATAATCTATTGGACACTATTTTACAGAAAAATTTGGCATGTCATGCTGTTTTATGGCACCCTGATTCACTACCATCTTTTACTAAAGAGTTCTTGTCTCCAAACCGAATTCCTCTGGATTCTGTTATCACTGATAAGGATGACCTGTCTGCAATTTCTGAGAAGAATGCTACTCAGGATGGGCTAGCTCACCAACTAACCTCATACATGGAAACTGTGAACGACTTTTATTTGCACACTGATGATCCTTTACATGACTTTCAAGTTGATTCTGGTACATTGCCATGTGCGGCTTGTGGAATTCTTGGGTATCCATTTATGTGCGTGGTTCAACCATCCAAGAAAGCATCAAAGGAGATTTTTGCTGCTGGGTGTTCTACAAAAATGAGGGAAGGTGAAATTATGCAAGAGCCAGAATCATGTTACCATCACCGGACAGATGCTATTTCAGGAGCCAGTATTCAAAGATGCAATGGCTGTGGATTGAGACCGCGGATTTTCTGCTTGGAACATGCCATTAGAATTGAGGAGCTACTGAGACCAAAAGGTGGGGCAAGGATGCTTATAATTTGTCACTCAGATTTTCAAAAGATAAAGGTGAATGCTGCGGCTATTGCAGAAGAAATTGGGGCTACCTTCAATTACAAAGAGGTCGTACTTGAGTTTGCTTCTAAGGAAGAATTGAGTTTCATTGAACTTGCAGTTGATAGCGAGCAGCTCACTGATTGCACAGAAGACTGGACATCAAAGCTTGGAATGAACTTAAGCTATAGTGTCAAGGCCAGAACCAGTTGTCCCTCAAAGAATATAGAGCAGGCGCTAAACCTTGACTATTTGCTCTCTGTTATTGCTCCCAGTTCAGTGATTTCAGGAATCCAATGGTGTTCCAGGAAATCTCGTACCAAACGTGACTCAAGTTATGGAAAAATTTTGAATTTATACAATGATAACCACCTGAAGCAGGAAAAAATTTTTGACCAACCAGGTGGTAACATGGAAGTAAAAGAAAAAGTGCTTCTCCAATATTCACGGAAGAAATATAGGATCGAATCAGGAAATTATACTGGGCCAAAATTCATATCTGATTGTGGCATGAAGTGTTCACTGGAAGTGACAGATTCTCATTGTGGAAAGATAAATCATAGTGAACAAGATACATTATTGGGTATCGTGCCACATGATGAAGTTGAGATGGCTGAAATTAATAGGAAACATGCTGTTGACCTTCATCCCACTGATGTAAGTTCACAAGCATTTGATTCAGTGTCGCCATGCACGGACAGACTTTCATGTGAAGTAATGTTGACTGAAACACTGACTTCAACTTCAAATGAGAAAATGAGGGTGGATGACAAAGTGACTAAGGGTGATGAGGATTTGAATGCTAAGAATTGTTGTGATTCACATGTTGAAGGTAGGCTAGATATAGGGAAATCCAGGGTCATTGGCGATACTAACATTAGAAGCTTGATGGCTGTTGGCAGGGAGCTTGTGACAAGTAGTCCTGTAGAGACAAGCAAAAAGCGTGATGGTGGAGGTCTCACCCTGGATCATGTACACTATGCAACTTGTGTTGCAGAAATCACAGAAAGTTTCGTCACGGACAAGGCCGCTCTTAAGCTTGATAGATGTGATCATGCTTCCAGCATTTCAGAAATACAGGATGTGATTGGGACTATAAAACAAGGTTGTATGTCAACTTGCATGGAGTCTACTATTACTACATTGGAGGACATTGACATGTCCACCCGTCCAAACCCAAGACAAAAGGATAGTGGTCAAGCTGGTAAGCAGGCTTTCTCTTTGCTGCCCAACAAAGATGGGGTCAAGTGTGGCAAAGTAAACGCCAATGCCAAAATGACTTCTAGAAACAGAATTGAAGGGGCTAGAGTAGTGCAGGGGACTGAAGCCCACAGTGACTTTGTGAGGAGTCCTTGTGAAGGACTGAGACCAAGGAAGAAACATGATCTAGCACTTGCATCAACAGGGAATGTAAAACAAAAGCATCCAGCAAAAAGAATTAAGAGATATTCAGGCTATTCAGATTCTCCTTCCCACAAACTGATGGATGGTAATAAGGCTTCTTACAAGTGTAATATTGAAGGCTGTTCAATGTTTTTTACGACAGGGGGAGCGCTGTCGTTACACAAACGGAACAGATGCCATCACGAAGAATGTGGAAAGAGGTTCAGGTCCCATAAATATTTGATGCTTCACCAGCGGGTTCATGACGATGAGAGGCCATTCAAGTGCACATGGAAGGGATGTGGTATGACTTTCAAGTGGGCTTGGGCTAGGACTGAACACTTAAGACTGCATACAGGTGAACGTCCTTACCAGTGCAAGGTTGAAGGTTGTGGCCTTACTTTCAGGTTTGTATCTGACTTCAGCCGTCATAGAAGGAAAACTGGGCATTTTGTAATACCTCCACATATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38449.p1 GENE.S_Transcript_38449~~S_Transcript_38449.p1 ORF type:complete len:1340 (+),score=269.73,JmjC|PF02373.18|8.9e-37,JmjN|PF02375.13|1.1e-15,zf-H2C2_2|PF13465.2|2.1e+03,zf-H2C2_2|PF13465.2|3.4e+03,zf-H2C2_2|PF13465.2|0.045,zf-H2C2_2|PF13465.2|7.1e-05 S_Transcript_38449:381-4400(+)
MDNVEIPNWLKELPLAPVFRPTDTEFADPIAYISKIEKEASAFGICKVIPPLPKPSKRYVFNNLNNSLSKSFQQCSDLNFVDASSSNSLKRVSGDKVKVNVNDTEAKAVFTTRQQELGQASKRSRVSVNNAQQPAAQKQVWQSGEVYTLEQFESKSKAFSKSVLGKIKEVTPQVIEALFWKAASEKPIYVEYANDVPGSGFGEPEGLLCYFQAQKRRTRRLFGQRHQGKSYSMQQDVKTVNNTSSGEVMRQSLCPVLEPPKECANGPPSLLSAATEQPTQLGPKCSSGEVEGTAGWKLSNSPWNLQVIARSAGSLTRFMMEDIPGVTSPMVYIGMLFSWFAWHVEDHELHSLNFLHMGAPKTWYAVPGGHAFALEEVIRRQAYGGDIDHLAALKLLGEKTTLLSPELLIASGIPCCRLVQNPGEFVVTFPRAYHVGFSHGFNCGEAANFGTPQWLTIAKDAAVRRAAMDHLPMLSHQQLLYLLTMSFISRIPKSLLTGVRSSRLRDHLKKERELLVKKAFIDDVLKENNLLDTILQKNLACHAVLWHPDSLPSFTKEFLSPNRIPLDSVITDKDDLSAISEKNATQDGLAHQLTSYMETVNDFYLHTDDPLHDFQVDSGTLPCAACGILGYPFMCVVQPSKKASKEIFAAGCSTKMREGEIMQEPESCYHHRTDAISGASIQRCNGCGLRPRIFCLEHAIRIEELLRPKGGARMLIICHSDFQKIKVNAAAIAEEIGATFNYKEVVLEFASKEELSFIELAVDSEQLTDCTEDWTSKLGMNLSYSVKARTSCPSKNIEQALNLDYLLSVIAPSSVISGIQWCSRKSRTKRDSSYGKILNLYNDNHLKQEKIFDQPGGNMEVKEKVLLQYSRKKYRIESGNYTGPKFISDCGMKCSLEVTDSHCGKINHSEQDTLLGIVPHDEVEMAEINRKHAVDLHPTDVSSQAFDSVSPCTDRLSCEVMLTETLTSTSNEKMRVDDKVTKGDEDLNAKNCCDSHVEGRLDIGKSRVIGDTNIRSLMAVGRELVTSSPVETSKKRDGGGLTLDHVHYATCVAEITESFVTDKAALKLDRCDHASSISEIQDVIGTIKQGCMSTCMESTITTLEDIDMSTRPNPRQKDSGQAGKQAFSLLPNKDGVKCGKVNANAKMTSRNRIEGARVVQGTEAHSDFVRSPCEGLRPRKKHDLALASTGNVKQKHPAKRIKRYSGYSDSPSHKLMDGNKASYKCNIEGCSMFFTTGGALSLHKRNRCHHEECGKRFRSHKYLMLHQRVHDDERPFKCTWKGCGMTFKWAWARTEHLRLHTGERPYQCKVEGCGLTFRFVSDFSRHRRKTGHFVIPPHI*

Click here to download the sequence:
Link to NCBI Protein BLAST