Transcript Information: S_Transcript_38458.p1


Annotated TAIR IDAT4G38760.1
Annotated Gene NameProtein of unknown function (DUF3414)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:18085033-18096166 | Reverse length=1965
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.978546103327
Replicate 216.324235707959
Replicate 316.924470436314
Condition 2: 8 Hour
Replicate 119.989860822525
Replicate 219.377636574309
Replicate 319.636417187619
Condition 3: 24 Hour
Replicate 121.050524090936
Replicate 217.272571549853
Replicate 318.814626053715


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38458.p1 GENE.S_Transcript_38458~~S_Transcript_38458.p1 ORF type:complete len:1980 (+),score=371.60,Nup188|PF10487.5|3.5e-24 S_Transcript_38458:181-6120(+)
ATGGCGGTTTCCGATCAAAAAACCTCCACAAAGTCCGTCGACTCTTCTCTCTGGTTCGACTCTTTCTCTCTCCTCCTCACCGACATCGAAAACCTCTCTCTCTCCTCCGACCTCCCTCCTTCTCTGGCTGAAAAGTTGAAGGAGAATCGCGCTTGGTTCTTGAACACCGTCAGTCAGTTTAAACCTCCGAGTCAGACATCTAAAGACGCATTGAATTCACAGCAAGTTAGCGTTGGTTCTCACGATTTGAACATCAAATCTCAGTATAAGGACTTGGCCTTGAAGCTTAGCTCCACTCTGTGTTTAGATGAGATACAATCATACATTCTTGTCGAAAGGTCCCTGGACCACAATACTGTTGTAGTTGATGGGGTTGCTCAAGGATTCTTTCATGAGATAGTGCTGCAATACTATACTGAAAGGCAATGCCTCCTAAAATGTGTTCGCCAGATGATTATCCATGCATTGAATGTTGAAGCTTCTCAGAAAGAAAAACAAGTCATTTGGCATGAGGTTGTCAAGCTTTTTTCAGATGGATTAGAGGGCAAGTTGATATCCATCCTTGACAGACTATGGTCATCTTCTTACCCCGAGAACATGGAGGTGGATCTTTACATCTTGTGGGCTGAAGAGATGGTGATTGAGGATAACTTGGTTTTGGACCTCCTATTTCTTGCTTACTATGAGTCGGTTTGTATTTGTGGTGCTGCTAAATGGAAGGAGTTATGCCTGCTCTATAAGGATATGACCGCTGGTTCGTCAAACTTTGTGAAACTTGGAGTGTCTGCTGAAGCTCTAAAATATTCTTATCGTGCTAAGATTCAGATGCTTTTGATCCTTATAGAGACCTTAAACTTTGAGAGTCTTCTTCAGTGGATACACGATGAAGTTCCTTTTAGGGATGGTTCGGCTGTCTTCTCTGTGAGCGATATTCTGGAGATGGATTCCATAGTCTCTAGTTTTGATGTTTGTGAAATGCAAGAAGTGGGCCTCCTTATCCTTGCGTGGGCTGTCTTGCTTTGTCTGGTTACATCTCTTCCTGGTAAAGAGGAACATAGTGAGCTCATGGAAATTGACCATGTTGGGTATGTTCGTCAAGCCTTTGAAACTGCTCCTTTGAGACTTTTTCTGGAAATACTTCGAAGTGATATTCTGAAGGATTCAGATGGACCTGTTGCTGGATATCGTAGCATCTTGAGAACGCTCATTTCTGCATTTATTGCATCGTATGAGATTAATATTCAGCTGGAAGATGATACCCTCAAACTATTATTAACTATCCTGTGTGAGATCTACCGGGGAGAGGAGTCCCTTTGCATTCAGTTCTGGGACAAGGACAGTATAGTTGACGGTCCTATTCGTAGTCTTCTTCGCAACTTGGAGGGTGAATTCCCTTACCGAACTATCGAGCTGACACGGTTTTTGTCAGCCTTGTCGAAGGGAAGTTGGCCTTCGGAGTGTGTGTACAATTTTATGGAGAAGTCTACTGGAATATCATCTGTCCTCGATATTGGCAGTGATCTATCAATTGGTGGGACATCTCCAATAGTTGAGACACAACTGCCATTGCATCTTCCTGCTGTTGATGGCTTACTTATTCCTAGTAAAACCCAGGGTCACATTCTCAGGATGATAGATTCCAGAACTGCTCTTGTGCGCTGGGAGTATAAGCAATCTGCACTGCTTGTCTTGCTTCTGCGTTTATCTCAAATAAGGGAGTTGGATGGTAATGAAGAGGTTCTTGTAGTCCTCGACCTGTTCAGTCGACTGGCATCCTTCAACACGGCCGTTTGTTTTTCTTTGATGAATATTGGCAAATCACTTCATGTTCAAACAGACTACAGCAACGGCCAGATGGAGAGCAATATTGGGATTGACGTGGTCGAGGTCTTGTGCAATCTTGTCAGAAATCTGTCACCCTATTCTGGCAGTGTTTTGTCTATGTCCATGGGTGTTAATATTTTGGCAAAGATGCTGAGATGTTCACCATCCCATGTGAGTACAGTAGTTATGAAGATGAACATATTTGATCTGTCCATGAAGACCAGTATCTTCAATGATTGGAGTAATGGTCTATCAAGTGGTTCATGGTTACTTTCTGGAAGACTCGCAAAAATGCTCTTGATTGATTGTGAACACAATGCCAGCTGCCCCTTGACTACTTCAGCTCTCGAATTCACCATGCAGCTCCTGGAAGCGGGAGTTGAAAATGATTTTGTGCTTGCGCTTGTCATTTTCTGTCTTCAGTATGTCTTTGTTAACCATGAATACTGGAAGTATAAGGCGAAACATGATCGCTGGAAGGTGACACTGAAAGTGCTTGAGGTGCTGAAGATAAGTATCATATCTATCCCTTATCTTACAAAGATCGGTGGGGCAATCAGAGATATCGTATTGTCTGATTCTTCAATCCATAGCATGTTCTTTCGAATTATTTGTACAACCTCGTCAACATTAGAGAAACTTTATGTCAGCTGTCTCTATGATTGGAGGGAGATTGATGGGTTGCAACGTGCTATATGTTCTACATTGGATATTCTAGTGAGCATTCTCTCCAAGTTGCCAGAGGATGGTTTCTCTGGCTTGCCATTATTTTACCAAGCAATTCTGTCAACCTCCACAAAGCCCCTTCCTGTTGTTGTGGCTTTGTCCTCCTTGTTGTCATATCACCGTGATGCTGCTATACAAGTAGGGGCTGCCGAGGCACTTTCTATGTTATGTTTAATTGCTGATCTGTCTGGGAATGCAAGCTTTGCTCTTGACAGTAAACAGGTGGTGCAATTACGTCAATCCATTGAAAATATCATCAGTGAACAGTCTGAAACAAATGAAGAACTCTTTGTCACTGTTATGAAGCTGCTCACTTCTGCAGCTAATCACCAGCCTGCTTTTCTTTCTGGTATCTTTGCTGGTGAAGAGACTAGAGCTGTCAATTCAAGAAATACTGGTGGCATAAATGAACAGACAAGTGATTCCACTGCTCATGCATTGAAATCTGAAAACGCAACACGTCTGGTGGATGTCCTTGTGCCTTATGTTGAAAAATCTGATATTATTATTGCGAGGAATGCTCGAGTTCTTTCAAGTATACTGCGTTTTATGAAAGCACTGTGGCAAGGAGCTGCTCAGTATATTGATATCTTGGAGGCCGTCAGAAAATCTAAGCAGTTCTGGAAGGCAATGTCTAACTCCATATTGCTGATCAGCAATAAGGATGCACCCTTGCCTAGAAATCTTTCTGAAGCGGAAATACAGAAGTTTGCTTATTCATATCAATGTCAATCAGCTGCATTGGACATCATGGCCTTAGAGCTGTTTCTGCAGAAAAAGTTATTACTTGCTGAGTCACTTGTAAGACAAGCTGATGGATTATCAAAAAGTAGAATTGCTGGTGGAAGTGGCAGTGAGACTCAAGGATCTAAAAGTTCATTCCACCTTGAGGATACCTTGTTTTCTTGGTTTGAGAGCGATGGTCTGAGAAATCTTCTGAAGTCATCTGCATCTTGCATTTGCAGTACTGAAATTTATTTTCATGCAAAGATTGCTTATGGCTTGCTTGCTGTGCACATCATTGCAAAGTTAGCTAGTGGTGATGCTGGAAGTCTGAAGGTCTCTTTCATGGAAAACATTACAGCACTGTCAACAAAGTTAATCAATCTGCCCGCATTTACTGAGTTGTGCACTCATTATACCCAGCTTGGTTACAGTGAAGGGACCAAGATAAAATCATTGATACTCAGTGATCTATATTATCATATGCAAGGAGAGCTGGAGGGACGTGACATTGAAAATGGACCATTCAAAGAGCTTTCGCGGTTCCTAGTTGACTCTAAACTCCTGCAAGCTTATCAAAAGAAGAATGATCGTGAACTTATTGGAGGAGATCAAATCACTCACCTATTTGATCTTTGGCGAGTACAACATGATATTGGTCTTGATATCTGGGATTTCTCAGAATGGAAAGCTTCCAAGAGTATTGCAGAAACTATGTTGCTTCACCTGCGGGATGCCAACTCAATGTCATTGCTTGTTGGCTCAAGGCTCCCAGCATTACGAGCGCTTATAGCTATCTTAACTCTTAATACAGGGGGTACGGTAGAGAGACAGAAAAGTACATTGAAGAGATTTTCTGGGGATGGAATTCTTGAATGCATGGACCATATATGCAAGGAGTTTCGAGCAGCTGTTGGAGTATTGGCAACAGCATTAGATTCTCCTCAGGAAGTTCTTGATTTTGTAGCTGCACAGGCTGAATTACTTCTTTGTCTTGCTAGAAATATAGATGGCAACATGCCTCCACCTACTTGTTCGATCATTCTGAAAACTTGTGGTTTTGCCCTGAAAGGATTTTGTGAATCTAGGTTGTTGGCCTCTGATGTTAATCAAACTATAAGATTATTACTCATGCTACTTCTGTTAGTGGTGAAGTTCATCCCTCACAGTATCCCAACATCCAATGTGACCGACAGTGAATCTGAACCCTTGCATGAGGTGTCTAATATTTGCTTGGGTCTATTGCCAGTTCTTTGCAGATGTACTGAAATCCCTGATCAGCTCATTCTCTCTCTCGCTACAATTGACATGATCATCAAAACATTTTTAACACCTAGCACATGGCTCCCCATCATCCAGCAACATCTTCAGTTGCAGCATCTCATGCTCCTGCTCCATGACAAGAGAAGCTTTGAATCTGTCCCAGTGGTACTCAAGTTCCTTTTGACGATTGCCAGTGTGAGAGAAGGTGCTGAGACGCTTATTGCTTCTGGATTTTTGTCATCTTTGAAAGTTTTGTTTGCTGAGAGATCAGATGGTAGTATGGCAATCTTGGCTGAACAAGAGAAGTCCATGATGCTTCGGAGCTATAGCGAGAAGCCGCAGTTTATCTGGGGTTTGGGTTTGGCCGTCTTTACAGCAATAATTTGCTCTTTAGGAGAATCTTCGCTTTGTGCTGATGTAGTAGATAAAATGACATCTTTCTTTGTCTCTGAGAAGGCTTATCTAATAGCTTATCACCTCAGCGCACCACATTTCCCCTCTGACGACCATGATAAGAAAAGGGCTAGGGCTCAGAAGAGGCATACCTTTCTATCGGTTTTCAGAGAGACAGAGCACACACTGATGCTGATAAGTGTCCTTGCAAAGCACAGAAACCCATGGGTCAAGGCCATCAAAGAAACTGGTTCTCAACTCAGGGAAAGGATTATTCATCTCTTAGCTTCCGTTAGTAGGACAAATCATCGTGTTGGAGAGTCACCAAATAGGTCACCTTTTGTATGTGTTCCCGTGTCTAAAGAAGAAAATGATTATTGCAAAAAGGCATCATTTATGAACAGCAGAAGTGGTTGGTTTGCTGTTGCTGCTCGTGGGTGCACATTAACGCCTTGTGTCACTGATGAATCACTGAAAACTGCTATTGTGGTCAAAGGTCAAGTGTCTGGGGGTGCAGATTCAGGGATTCCTACATACTTCTCAGATACTGTGGCCGTACAGATATACAGGATGACATTTCTTATTTTAAAATTCTTATGCCTACAAGCTGATGATGCTGCTCGAAGGGCAGAAGAACTAGGCTTCATTGATCTCTCTCATTTTCCAGAGCTCCCAGACCCAGATATTTTACATGGGTTGCAGGACCAGAGCATTGCTATTGTCACTGAAGTTTGTGAAGCCAATAAATCCAAACAGATCCATACGGAGACACAAGGTGTTTGCCTTTTGTTGCTTAAGATACTGGAAATGGCTTTGTATTTGGAACTTTGTGTGTCTCAAATGTGTGGAATAAGACCTGTGCTGGGACATGTGGAAGATTTTTCAAAGGAATTGCAATCATTGGTTAGAGCTACGGAGGGCCAAACGTTCTTGAAATTCTCAATGAAGCATTTGAACCAAATTGTGTCGTTCTTGTATCCAGGATTGTTACAAGGTGAAGGCATCCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38458.p1 GENE.S_Transcript_38458~~S_Transcript_38458.p1 ORF type:complete len:1980 (+),score=371.60,Nup188|PF10487.5|3.5e-24 S_Transcript_38458:181-6120(+)
MAVSDQKTSTKSVDSSLWFDSFSLLLTDIENLSLSSDLPPSLAEKLKENRAWFLNTVSQFKPPSQTSKDALNSQQVSVGSHDLNIKSQYKDLALKLSSTLCLDEIQSYILVERSLDHNTVVVDGVAQGFFHEIVLQYYTERQCLLKCVRQMIIHALNVEASQKEKQVIWHEVVKLFSDGLEGKLISILDRLWSSSYPENMEVDLYILWAEEMVIEDNLVLDLLFLAYYESVCICGAAKWKELCLLYKDMTAGSSNFVKLGVSAEALKYSYRAKIQMLLILIETLNFESLLQWIHDEVPFRDGSAVFSVSDILEMDSIVSSFDVCEMQEVGLLILAWAVLLCLVTSLPGKEEHSELMEIDHVGYVRQAFETAPLRLFLEILRSDILKDSDGPVAGYRSILRTLISAFIASYEINIQLEDDTLKLLLTILCEIYRGEESLCIQFWDKDSIVDGPIRSLLRNLEGEFPYRTIELTRFLSALSKGSWPSECVYNFMEKSTGISSVLDIGSDLSIGGTSPIVETQLPLHLPAVDGLLIPSKTQGHILRMIDSRTALVRWEYKQSALLVLLLRLSQIRELDGNEEVLVVLDLFSRLASFNTAVCFSLMNIGKSLHVQTDYSNGQMESNIGIDVVEVLCNLVRNLSPYSGSVLSMSMGVNILAKMLRCSPSHVSTVVMKMNIFDLSMKTSIFNDWSNGLSSGSWLLSGRLAKMLLIDCEHNASCPLTTSALEFTMQLLEAGVENDFVLALVIFCLQYVFVNHEYWKYKAKHDRWKVTLKVLEVLKISIISIPYLTKIGGAIRDIVLSDSSIHSMFFRIICTTSSTLEKLYVSCLYDWREIDGLQRAICSTLDILVSILSKLPEDGFSGLPLFYQAILSTSTKPLPVVVALSSLLSYHRDAAIQVGAAEALSMLCLIADLSGNASFALDSKQVVQLRQSIENIISEQSETNEELFVTVMKLLTSAANHQPAFLSGIFAGEETRAVNSRNTGGINEQTSDSTAHALKSENATRLVDVLVPYVEKSDIIIARNARVLSSILRFMKALWQGAAQYIDILEAVRKSKQFWKAMSNSILLISNKDAPLPRNLSEAEIQKFAYSYQCQSAALDIMALELFLQKKLLLAESLVRQADGLSKSRIAGGSGSETQGSKSSFHLEDTLFSWFESDGLRNLLKSSASCICSTEIYFHAKIAYGLLAVHIIAKLASGDAGSLKVSFMENITALSTKLINLPAFTELCTHYTQLGYSEGTKIKSLILSDLYYHMQGELEGRDIENGPFKELSRFLVDSKLLQAYQKKNDRELIGGDQITHLFDLWRVQHDIGLDIWDFSEWKASKSIAETMLLHLRDANSMSLLVGSRLPALRALIAILTLNTGGTVERQKSTLKRFSGDGILECMDHICKEFRAAVGVLATALDSPQEVLDFVAAQAELLLCLARNIDGNMPPPTCSIILKTCGFALKGFCESRLLASDVNQTIRLLLMLLLLVVKFIPHSIPTSNVTDSESEPLHEVSNICLGLLPVLCRCTEIPDQLILSLATIDMIIKTFLTPSTWLPIIQQHLQLQHLMLLLHDKRSFESVPVVLKFLLTIASVREGAETLIASGFLSSLKVLFAERSDGSMAILAEQEKSMMLRSYSEKPQFIWGLGLAVFTAIICSLGESSLCADVVDKMTSFFVSEKAYLIAYHLSAPHFPSDDHDKKRARAQKRHTFLSVFRETEHTLMLISVLAKHRNPWVKAIKETGSQLRERIIHLLASVSRTNHRVGESPNRSPFVCVPVSKEENDYCKKASFMNSRSGWFAVAARGCTLTPCVTDESLKTAIVVKGQVSGGADSGIPTYFSDTVAVQIYRMTFLILKFLCLQADDAARRAEELGFIDLSHFPELPDPDILHGLQDQSIAIVTEVCEANKSKQIHTETQGVCLLLLKILEMALYLELCVSQMCGIRPVLGHVEDFSKELQSLVRATEGQTFLKFSMKHLNQIVSFLYPGLLQGEGIL*

Click here to download the sequence:
Link to NCBI Protein BLAST