Transcript Information: S_Transcript_38467.p1


Annotated TAIR IDAT5G53500.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21726167-21728524 | Reverse length=654
E-Value2E-193
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.726858238448
Replicate 214.154648809563
Replicate 316.462135416324
Condition 2: 8 Hour
Replicate 115.46611292177
Replicate 216.973899107408
Replicate 315.16189997007
Condition 3: 24 Hour
Replicate 112.247758944517
Replicate 212.137940927918
Replicate 312.734142363531


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38467.p1 GENE.S_Transcript_38467~~S_Transcript_38467.p1 ORF type:complete len:717 (+),score=119.30,WD40|PF00400.28|0.00044,WD40|PF00400.28|4.1e-06,WD40|PF00400.28|0.00029,WD40|PF00400.28|5.4e+03,WD40|PF00400.28|2.7e+02,WD40|PF00400.28|1.2,WD40|PF00400.28|62 S_Transcript_38467:641-2791(+)
ATGGATGCCTACATTGATCATGGTGAAAACCAATTTTTTGATGCCGTTGAAGATATTGCTGAATTGTCCGATTCGAGTTCAGATGGCCAGGAGAATCTTTATGGTTCAGGAGGGCGCAATTCGCCCTCAAGGAATGCTAAATTTGATGTGTGGATACAAAATCTAGAAAGTGTTGAAGCCCGGCGAAGTAAATTCTTTAATTTGTTGGGGTTTGATGTAAATAATAAGATTTCTGGTGATGATTCTGAAGATGGTTGTGATTTTGGAGGAGAGGTTAATAGGATTACAAGTAGTAGTGGGGCTGTGCTTAGGAGGAGCCCAAGTTTTGAATTTGAGTTCTCGTCAAGTAGGTCTTCGATGTCATTCTGCTCGGTTGATGTATCAGAGTTATCTGGGAATTTAATTACTAAGGAGAAGGAGAACATTGTCTGCAACATTGAGAATGTGGATGGGGGGCGGGGACTTGAGAGCAATGCGGGTGATCGTAACAGAGAATTAGATTCGGGCATCTCAGTCACCGGTGAACATCCTGAATGCAGTTCGAGTTCTTCTTCTAGTGGAGAATTCTCACCCGTGAAAAACATGTCTAGAAGCCGTTCTGCTGGACAGACAAAGAGGGTAAAGAAATGGTGGTTGAGTAGATTGCGTAGCTTCACTTGTGTTGTGGAAGGGGGAGAGGAATCGTGCCATTGTGAATCAAACCCAGGGTCGAAGATTCAGAGAGTGAAGGTTCATCAATCAAAGAAACAATCTAAGGAACTTTCAGCTCTTTTCTATGGTCAAAACATCCAAGCCCACAAGGGTGCAATCTTGACGATGAAATTCAGCCCTGATGGCCAATTCCTAGCTAGTGCTGGAGAAGACAGAATAGTGCGCATGTGGCGGGTTGTGGAGGATGATCGAATGAATGAGCGTGATATCCCTGACATGGATCCATCATGTGTCTACTTTACAATGAATCATCTTTCTGACTTAAAACCCCTGAGCATGGATAGAGAAAAGAATGGTAAATTGAGGAGAAATTCTGACTCAGCTTGTGTGATTCTCCCACTGAAGGTCTTCCGAATTTTGGAGAAGCCATTACATGAATTCCGAGGCCACACCAGTGAAATATTGGATCTTTCATGGTCGAATAATAATTGTCTGCTATCATCGTCAGTGGATAAAACTGTTCGTTTGTGGCGAGTTGGATTCCCACATTGCCTCAAGGTCTTCCCGCATAATAATTATGTGACATGCGTTCAGTTTAATCCTCTAAGTGACAATCACTTCATTAGCGGGTCAATAGATGGAAAGGTTCGCATTTGGGAAATATCTTGTTGCAAAGTTGTTAATTGGATTGAGATCAAAGACATAGTTACTGCTGTCTGTTACCACCCTGATGGCCAGGGAGGAATCATCGGCTCGATTACAGGCAGTTGTCGCTTTTATAGCATAGCAGATAATCAGTTGCATCTAGATGCTCAGATCTTCTTGCGTAACAAAAAGAAATCTTCTGGGAAAAGAGTAACTGGCTTCCAGTTCTTTCCTCAAGACCCAAGCAAAGTCATGGTCTCTTGTGCTGATTCACAAGTTAGAATAATTCAAGGGGTGAATGTGATTGGCAAATATAAGGGTCTTCGGAGCACTGGATCTTATTGCTCAGCCTTTTTTACATCTGATGGGAAGCATATAGTGTCTGCATCTGAGGATTCCAATGTATACATATGGAAGTGTGCTGATCAAGATTATGGACACCCATCACAGATGAAGAAGGTCAAGTCTTGTGAGAGATTTATTTCCAATGCATCTGTTGCAATGCCCTGGCCAGGATTGCAAAAAGGGAGCAGAGGAAATAGGTTGCAAAATGGTACCCTTGGTGGTGTAACTCAAGGGGTGCGCTCGTTCTTTTCACCTTCCCATTTCTCATGCGGGCAAGATTTATTTGTAGAGTCATGTCCTCCAAAAGGATCAGCATTATGGCCAGAGGAAAAGCTTCTCGCCCGAAGCCCTTTGAGCTCAACATCATCAATACACAAATCTGAGTACAAATTCCTGAGAACCTGTCAGAGCAGATTAGATTCAGACACTTGGGGTATGGTCATTGTGACTGCTGGCTGGGATGGACAGATCAGGTCCTTCCACAACTACGGGTTACCAGTACCCCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38467.p1 GENE.S_Transcript_38467~~S_Transcript_38467.p1 ORF type:complete len:717 (+),score=119.30,WD40|PF00400.28|0.00044,WD40|PF00400.28|4.1e-06,WD40|PF00400.28|0.00029,WD40|PF00400.28|5.4e+03,WD40|PF00400.28|2.7e+02,WD40|PF00400.28|1.2,WD40|PF00400.28|62 S_Transcript_38467:641-2791(+)
MDAYIDHGENQFFDAVEDIAELSDSSSDGQENLYGSGGRNSPSRNAKFDVWIQNLESVEARRSKFFNLLGFDVNNKISGDDSEDGCDFGGEVNRITSSSGAVLRRSPSFEFEFSSSRSSMSFCSVDVSELSGNLITKEKENIVCNIENVDGGRGLESNAGDRNRELDSGISVTGEHPECSSSSSSSGEFSPVKNMSRSRSAGQTKRVKKWWLSRLRSFTCVVEGGEESCHCESNPGSKIQRVKVHQSKKQSKELSALFYGQNIQAHKGAILTMKFSPDGQFLASAGEDRIVRMWRVVEDDRMNERDIPDMDPSCVYFTMNHLSDLKPLSMDREKNGKLRRNSDSACVILPLKVFRILEKPLHEFRGHTSEILDLSWSNNNCLLSSSVDKTVRLWRVGFPHCLKVFPHNNYVTCVQFNPLSDNHFISGSIDGKVRIWEISCCKVVNWIEIKDIVTAVCYHPDGQGGIIGSITGSCRFYSIADNQLHLDAQIFLRNKKKSSGKRVTGFQFFPQDPSKVMVSCADSQVRIIQGVNVIGKYKGLRSTGSYCSAFFTSDGKHIVSASEDSNVYIWKCADQDYGHPSQMKKVKSCERFISNASVAMPWPGLQKGSRGNRLQNGTLGGVTQGVRSFFSPSHFSCGQDLFVESCPPKGSALWPEEKLLARSPLSSTSSIHKSEYKFLRTCQSRLDSDTWGMVIVTAGWDGQIRSFHNYGLPVPH*

Click here to download the sequence:
Link to NCBI Protein BLAST