Transcript Information: S_Transcript_384715.p1


Annotated TAIR IDAT1G63080.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23388884-23390728 | Reverse length=614
E-Value3E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 11.3328368948208
Replicate 20.27964810799658
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.31527555506395


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_384715.p1 GENE.S_Transcript_384715~~S_Transcript_384715.p1 ORF type:internal len:80 (+),score=12.53,PPR_2|PF13041.2|3.6e-18,PPR_2|PF13041.2|2.8e-15,PPR_1|PF12854.3|2.5e-08,PPR_1|PF12854.3|2.3e-13,PPR_1|PF12854.3|1.6,PPR|PF01535.16|9.2e-09,PPR|PF01535.16|1.9e-08,PPR|PF01535.16|1e+02,PPR_3|PF13812.2|8.6e-06,PPR_3|PF13812.2|1.4e-07,PPR_3|PF13812.2|6.6e+02 S_Transcript_384715:1-237(+)
GTGACTACCTATAACACCATCATTGATAGCCTTTGTAAAGGCAGGTTCTTGCCTCAGGCCCTCAAGCTTTTCTCCGAGATGAAAAGCCTGGGCATTTCACCCGATGTCATCACTTATAATACGTTAGTTAGAGGCTTGTGCACTTTGGGGCGTTGGAAAGATGCTGAGGCATTGTTCACTGAGATGCTGGACAACAACATAGCTCCAGCTGTTGATACTTTCAACACCATGATTGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_384715.p1 GENE.S_Transcript_384715~~S_Transcript_384715.p1 ORF type:internal len:80 (+),score=12.53,PPR_2|PF13041.2|3.6e-18,PPR_2|PF13041.2|2.8e-15,PPR_1|PF12854.3|2.5e-08,PPR_1|PF12854.3|2.3e-13,PPR_1|PF12854.3|1.6,PPR|PF01535.16|9.2e-09,PPR|PF01535.16|1.9e-08,PPR|PF01535.16|1e+02,PPR_3|PF13812.2|8.6e-06,PPR_3|PF13812.2|1.4e-07,PPR_3|PF13812.2|6.6e+02 S_Transcript_384715:1-237(+)
VTTYNTIIDSLCKGRFLPQALKLFSEMKSLGISPDVITYNTLVRGLCTLGRWKDAEALFTEMLDNNIAPAVDTFNTMID

Click here to download the sequence:
Link to NCBI Protein BLAST