Transcript Information: S_Transcript_38485.p1


Annotated TAIR IDAT1G70610.1
Annotated Gene Nametransporter associated with antigen processing protein 1
Annotated Gene Symbol(s)ATTAP1, TAP1
Annotation TypeOrtholog
Chromosome Positionchr1:26622086-26626331 | Forward length=700
E-Value4.2E-219
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.514196452772
Replicate 217.29002283691
Replicate 317.878162530021
Condition 2: 8 Hour
Replicate 116.320451773316
Replicate 217.303940070319
Replicate 318.314228248361
Condition 3: 24 Hour
Replicate 116.673441684658
Replicate 215.309635983206
Replicate 320.074688404072


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38485.p1 GENE.S_Transcript_38485~~S_Transcript_38485.p1 ORF type:complete len:490 (+),score=51.71,ABC_membrane|PF00664.19|1.5e-39 S_Transcript_38485:97-1566(+)
ATGGCTCTCACCGTCTTCAACCTCAAACCTCCATTAACTCTCTCTCATCCTCGCCCTTCATCTCCTTCTCCAATCTTTTCTCTCCACTCCTCAACAAACCCAAACCTTCACCTCCCCTTCCTCTCCTCTTCCTTCCCCCGAACTCGCCGTCACTGCCGGCGGTTCGTCCCCGTCAAAGTCAACTCAACCTCAGTAAACGGAATCTCAACCGCTAACACTCCAGAGAAGCAGCAATTGAGCGAAGAAAATGTCGATTTCGGAGGGAGAATTCGAAGCTCTTTTGAGAAATTGTGGTCGGTTTTGCCAGGTGGAAGCTGGTGGAGATTATCCGATGAAGACGTTGACGTTGCTCTAGCAGCGAAGCCGGTAACTGTTTGGAGTGCTCTTCATCGGATGTGGCAACTTGTTTCTAACGATCGTTGGGTCATTTTTGCTGCCTTTTCTGCCCTAATTCTCACTGCGCTTTCGGAGATCTCCATACCACATTACTTGACAGCATCAATATTTTCAGCACAGAGTGGCAAAGTTATGGTCTTTCGTCAAAATGTGGTGCTTTTGGTAATCTTTTGCATCACTGCGGGAATATGCAGCGGCATAAGGGGATGCTGTTTCAGCATTGCAAACATGATCCTCGTCAAGAGAATGAGGGAAACATTGTATACTTCTCTTCTCCTTCAGGAAATATCTTTTTTTGATGCTTCAACAGTTGGTGAGCTCACTAGTAGGCTTGGAGCAGATTGTCAGCAAGTATCTCGTGTTATTGGAAATGATCTTAATCTAATATCACGCAACATTTTGCAGGGGGGTGGTGCCTTGATTTACCTGCTAATTTTGTCGTGGCCGCTTGGTTTATGCACCTTGGGAATATGTATTACACTTTCTTCAATTATGATAGTTTATGGCCAGTACCAGAAAAAGGCAGCAAAGCTGACACAGGAATTTACCGCCTCTGCTAATGATGTTGCTCAAGAGACGCTATCTTTGATGCGAACAATTAGAGTTTATGGCACAGAAAATCAAGAACTGAAAAGGTACGAAATCTGGCTGCAAAAGTTAGCTGACATAAGCCTGAGACAAAGTACTGCATATGGACTCTGGAACTTTAGCTTCAATACTCTTTATCACTCGACACAGGTCATAGCTGTGCTGATTGGGGGAATGTCTATTCTGTCTGGTCGCCTATCTGCTGAGCAGCTTACAAAATTTCTCTTGTACAGTGAATGGCTCATCTACTCCACATGGTGGATAGGGGATAATGTGTCATCATTGATGCAGTCAGTGGGAGCTAGTGAGAAAGTATTTCAGTTGATGGATCTCTTGCCCAGTGATCAGTTCACCTCAGGGGGACTGAAGCCACAGAAACTGACAGGACATATTGATTTTGTGAATGTGTCATTCTACTATCCTACAAGGCCAGAGGTACCTCTAGCACTGGGCTTGATATTATTGCTCTATTTACTCTTTTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38485.p1 GENE.S_Transcript_38485~~S_Transcript_38485.p1 ORF type:complete len:490 (+),score=51.71,ABC_membrane|PF00664.19|1.5e-39 S_Transcript_38485:97-1566(+)
MALTVFNLKPPLTLSHPRPSSPSPIFSLHSSTNPNLHLPFLSSSFPRTRRHCRRFVPVKVNSTSVNGISTANTPEKQQLSEENVDFGGRIRSSFEKLWSVLPGGSWWRLSDEDVDVALAAKPVTVWSALHRMWQLVSNDRWVIFAAFSALILTALSEISIPHYLTASIFSAQSGKVMVFRQNVVLLVIFCITAGICSGIRGCCFSIANMILVKRMRETLYTSLLLQEISFFDASTVGELTSRLGADCQQVSRVIGNDLNLISRNILQGGGALIYLLILSWPLGLCTLGICITLSSIMIVYGQYQKKAAKLTQEFTASANDVAQETLSLMRTIRVYGTENQELKRYEIWLQKLADISLRQSTAYGLWNFSFNTLYHSTQVIAVLIGGMSILSGRLSAEQLTKFLLYSEWLIYSTWWIGDNVSSLMQSVGASEKVFQLMDLLPSDQFTSGGLKPQKLTGHIDFVNVSFYYPTRPEVPLALGLILLLYLLFC*

Click here to download the sequence:
Link to NCBI Protein BLAST