Transcript Information: S_Transcript_38487.p2


Annotated TAIR IDAT1G70610.1
Annotated Gene Nametransporter associated with antigen processing protein 1
Annotated Gene Symbol(s)ATTAP1, TAP1
Annotation TypeOrtholog
Chromosome Positionchr1:26622086-26626331 | Forward length=700
E-Value9.8E-135
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.033521157249
Replicate 237.230957378306
Replicate 335.22850759719
Condition 2: 8 Hour
Replicate 141.567850657224
Replicate 237.402934444543
Replicate 340.966394615824
Condition 3: 24 Hour
Replicate 138.39920926081
Replicate 241.60934156595
Replicate 339.409444382994


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_38487.p2 GENE.S_Transcript_38487~~S_Transcript_38487.p2 ORF type:complete len:256 (+),score=50.92,ABC_tran|PF00005.23|1.9e-34,ABC_tran|PF00005.23|8.4e+03,SMC_N|PF02463.15|1.2,SMC_N|PF02463.15|2.6e-06,AAA_21|PF13304.2|1.7e-07 S_Transcript_38487:2311-3078(+)
ATGTTTTATTTGCTGAAAATTCTTTTGATTTTTGCACCATTCTGGGAGTTTAACATGCTCCAATTTAAACATGTGTCTGTACTGCAAGATCTGAACATTTCTATGCATCCCAATGAAGTAATTGCTCTTGTCGGTCTGAGTGGAAGTGGAAAGAGCACAATTGTAAATCTTCTACTACGTCTTTACGAACCAACCAGTGGCAAGATACTGATAGATGGCTTCTCTCTAAAAGAATTAGACACAAAATGGTTGAGAGAAAGAATTGGATATGTGGGCCAGGAACCTCGACTTTTCAGAATGGACATAAGCTCAAACATTAAATATGGATGCCCCAGAGATGTCACGCAGGAAGATGTCGAGTGGGCTGCTAAGCAAGCTTTTGCTCATGATTTTATTTCAGCCCTGCCTAATGGTTACGATACAATTGTTGATGATGATCTGCTCAGTGGCGGGCAAAAACAACGAATTGCCATTGCTAGAGCTATCCTTCGGGATCCAAGCATTTTGATCCTCGATGAGGCAACCAGTGCATTGGATGCAGAAAGTGAGCACAATGTTAAGGGTGTTCTGCGTGCAGTAAAAAATGACTCTCAGTCAAGGAGAACTGTCGTAGTAATTGCACATAGGCTTTCTACTATACAAGCTGCAGATAGAATAGTGGTGATGGATAGTGGACAAATTGTTGAGATGGGCAGTCACAAGGAGCTTCTCCTGAAGGAGGGTTTGTATGCAAGATTAACAAGGAGACAAGTGGATGCCGTGGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_38487.p2 GENE.S_Transcript_38487~~S_Transcript_38487.p2 ORF type:complete len:256 (+),score=50.92,ABC_tran|PF00005.23|1.9e-34,ABC_tran|PF00005.23|8.4e+03,SMC_N|PF02463.15|1.2,SMC_N|PF02463.15|2.6e-06,AAA_21|PF13304.2|1.7e-07 S_Transcript_38487:2311-3078(+)
MFYLLKILLIFAPFWEFNMLQFKHVSVLQDLNISMHPNEVIALVGLSGSGKSTIVNLLLRLYEPTSGKILIDGFSLKELDTKWLRERIGYVGQEPRLFRMDISSNIKYGCPRDVTQEDVEWAAKQAFAHDFISALPNGYDTIVDDDLLSGGQKQRIAIARAILRDPSILILDEATSALDAESEHNVKGVLRAVKNDSQSRRTVVVIAHRLSTIQAADRIVVMDSGQIVEMGSHKELLLKEGLYARLTRRQVDAVV*

Click here to download the sequence:
Link to NCBI Protein BLAST